RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 LINGO4Q6UY18 593 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 C15orf52Q6ZUT6 534 aaKnown RBP13.42□□□□□ -0.26
CLCN6-201ENST00000312413 CIR1Q86X95 450 aaPredicted RBP13.42□□□□□ -0.26
CLCN6-201ENST00000312413 SAMD14Q8IZD0 417 aaPredicted RBP13.42□□□□□ -0.26
CLCN6-201ENST00000312413 SLCO2A1Q92959 643 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 ITFG2Q969R8 447 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 TMEM203Q969S6 136 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 TRIM43Q96BQ3 446 aaPredicted RBP13.42□□□□□ -0.26
CLCN6-201ENST00000312413 FUZQ9BT04 418 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 FZD10Q9ULW2 581 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 NEMP2A6NFY4 417 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 SLC35G6P0C7Q6 338 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 GLUD2P49448 558 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 RASGEF1BQ0VAM2 473 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 TMEM17Q86X19 198 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 OXR1Q8N573 874 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 TUBA1CQ9BQE3 449 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 SLC30A2Q9BRI3 323 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 TTPALQ9BTX7 342 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 ZSCAN5AQ9BUG6 496 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 XKR8Q9H6D3 395 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 AKTIPQ9H8T0 292 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 CTPS2Q9NRF8 586 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 MTMR10Q9NXD2 777 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 KIDINS220Q9ULH0 1771 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 COL1A2P08123 1366 aa13.42□□□□□ -0.26
CLCN6-201ENST00000312413 TBC1D3DA0A087WVF3 549 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TBC1D3IA0A087WXS9 549 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TBC1D3EA0A087X179 549 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TBC1D3KA0A087X1G2 549 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TBC1D3FA6NER0 549 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TBC1D3LB9A6J9 549 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ADM5C9JUS6 153 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 FFAR2O15552 330 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ALPPP05187 535 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TBC1D3HP0C7X1 549 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 DDX6P26196 483 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 NRG3P56975 720 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 MPP2Q14168 576 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TSTQ16762 297 aaKnown RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 OGFRL1Q5TC84 451 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TBC1D3GQ6DHY5 549 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TBC1D3CQ6IPX1 549 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TCEAL6Q6IPX3 200 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ZNF627Q7L945 461 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TAC4Q86UU9 113 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TBC1D3Q8IZP1 549 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 NAT16Q8N8M0 369 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 COQ8BQ96D53 544 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 MND1Q9BWT6 205 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ACTR3BQ9P1U1 418 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 PCDHGB1Q9Y5G3 927 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 COLEC10Q9Y6Z7 277 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 A0A1W2PPW3 197 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 PSMD9O00233 223 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 STBD1O95210 358 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 FUT4P22083 530 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 NSG1P42857 185 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TAF1AQ15573 450 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 FAM76BQ5HYJ3 339 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 CES5AQ6NT32 575 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 MSANTD2Q6P1R3 559 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ERMP1Q7Z2K6 904 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ZNF676Q8N7Q3 588 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 THAP6Q8TBB0 222 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 RBM18Q96H35 190 aaKnown RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 HNRNPABQ99729 332 aaKnown RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 NUDT15Q9NV35 164 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ZIM2Q9NZV7 527 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 MAFFQ9ULX9 164 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 A0A1B0GVM2 712 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 A0A1W2PRB8 838 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 GMFGO60234 142 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 DDNO94850 711 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 CYB5AP00167 134 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ABCA11PQ4W5N1 156 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 OR7D4Q8NG98 312 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 SLC35B2Q8TB61 432 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TRPM4Q8TD43 1214 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 FEM1CQ96JP0 617 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 TACSTD2P09758 323 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 HK1P19367 917 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 NPR2P20594 1047 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 GSK3BP49841 420 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ANKDD1AQ495B1 522 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 PRAMEF19Q5SWL8 479 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 PAQR7Q86WK9 346 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 COX18Q8N8Q8 333 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 GALNT6Q8NCL4 622 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 PTPN18Q99952 460 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 LIN28AQ9H9Z2 209 aaKnown RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 THUMPD1Q9NXG2 353 aaKnown RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 FLRT1Q9NZU1 646 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 SMIM35A0A1B0GVV1 85 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ILVBLA1L0T0 632 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 CLIC1O00299 241 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 XPNPEP2O43895 674 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 VIPP01282 170 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 HLA-DPB1P04440 258 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms