RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SLC9B1P1A6NJY1 282 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 EBLN1P0CF75 366 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 FDXRP22570 491 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 TMPRSS3P57727 454 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 SH3BP2P78314 561 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 ARHGAP19Q14CB8 494 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 FBXO38Q6PIJ6 1188 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 PIWIL4Q7Z3Z4 852 aaKnown RBP19.17■□□□□ 0.66
VEGFB-201ENST00000309422 ZC3HC1Q86WB0 502 aaKnown RBP19.17■□□□□ 0.66
VEGFB-201ENST00000309422 SYTL1Q8IYJ3 562 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 D2HGDHQ8N465 521 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 PPM1NQ8N819 430 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 C19orf47Q8N9M1 422 aaKnown RBP19.17■□□□□ 0.66
VEGFB-201ENST00000309422 TCTN2Q96GX1 697 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 PITPNM3Q9BZ71 974 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 PLAC1Q9HBJ0 212 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 FGF21Q9NSA1 209 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 ZDHHC18Q9NUE0 388 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 UTP6Q9NYH9 597 aaKnown RBP19.17■□□□□ 0.66
VEGFB-201ENST00000309422 GALPQ9UBC7 116 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 IKBKGQ9Y6K9 419 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 ASPMQ8IZT6 3477 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 ARHGEF33A8MVX0 844 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 SLC16A5O15375 505 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 MT-ND3P03897 115 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 GABRB3P28472 473 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 OAS2P29728 719 aaKnown RBP19.16■□□□□ 0.66
VEGFB-201ENST00000309422 RPA3P35244 121 aaPredicted RBP19.16■□□□□ 0.66
VEGFB-201ENST00000309422 SPRP35270 261 aaPredicted RBP19.16■□□□□ 0.66
VEGFB-201ENST00000309422 CDKN2DP55273 166 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 SLMAPQ14BN4 828 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 TRADDQ15628 312 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.16■□□□□ 0.66
VEGFB-201ENST00000309422 PAQR3Q6TCH7 311 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 TAOK1Q7L7X3 1001 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 TMEM126BQ8IUX1 230 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 SPACA3Q8IXA5 215 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 GPR135Q8IZ08 494 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 NKAPQ8N5F7 415 aaKnown RBP19.16■□□□□ 0.66
VEGFB-201ENST00000309422 ZSCAN1Q8NBB4 408 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 FBXO15Q8NCQ5 510 aaPredicted RBP19.16■□□□□ 0.66
VEGFB-201ENST00000309422 FBF1Q8TES7 1133 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 SMPDL3AQ92484 453 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 IL17FQ96PD4 163 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 FCRL4Q96PJ5 515 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 SLC30A3Q99726 388 aa19.16■□□□□ 0.66
VEGFB-201ENST00000309422 DMGDHQ9UI17 866 aaKnown RBP19.16■□□□□ 0.66
VEGFB-201ENST00000309422 FAM159BA6NKW6 160 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.15■□□□□ 0.66
VEGFB-201ENST00000309422 MYO1CO00159 1063 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 TAF4O00268 1085 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 STK17BO94768 372 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 RHOXF2BP0C7M4 288 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 POU4F1Q01851 419 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 USP10Q14694 798 aaKnown RBP19.15■□□□□ 0.66
VEGFB-201ENST00000309422 KCNAB1Q14722 419 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 GRTP1Q5TC63 336 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 THEMIS2Q5TEJ8 643 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 NLGN4XQ8N0W4 816 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 C2orf73Q8N5S3 287 aaPredicted RBP19.15■□□□□ 0.66
VEGFB-201ENST00000309422 ESX1Q8N693 406 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 NLGN4YQ8NFZ3 816 aaPredicted RBP19.15■□□□□ 0.66
VEGFB-201ENST00000309422 HMGCLL1Q8TB92 370 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 ASB11Q8WXH4 323 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 CYTH2Q99418 400 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 RHOXF2Q9BQY4 288 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 EFHD1Q9BUP0 239 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 POPDC3Q9HBV1 291 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 LRRC4CQ9HCJ2 640 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 GPAMQ9HCL2 828 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 SERTAD3Q9UJW9 196 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 MED16Q9Y2X0 877 aa19.15■□□□□ 0.66
VEGFB-201ENST00000309422 PIKFYVEQ9Y2I7 2098 aa19.14■□□□□ 0.66
VEGFB-201ENST00000309422 RAD1O60671 282 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 CCNYL3P0C7X3 344 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 FGF5P12034 268 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 ST6GAL1P15907 406 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 CMPK1P30085 196 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 PNLIPRP1P54315 467 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 KBTBD12Q3ZCT8 623 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.14■□□□□ 0.65
VEGFB-201ENST00000309422 TEX35Q5T0J7 233 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 FRA10AC1Q70Z53 315 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 TRIM73Q86UV7 250 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 ZFAND4Q86XD8 727 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 CACNA2D3Q8IZS8 1091 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 EEF1AKMT1Q8WVE0 214 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 HNRNPLLQ8WVV9 542 aaKnown RBP19.14■□□□□ 0.65
VEGFB-201ENST00000309422 TRAPPC9Q96Q05 1148 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 OR2A14Q96R47 310 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 RBBP8Q99708 897 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 KLHL25Q9H0H3 589 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 APMAPQ9HDC9 416 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 SPHK1Q9NYA1 384 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 PSAT1Q9Y617 370 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 AKAP13Q12802 2813 aa19.14■□□□□ 0.65
VEGFB-201ENST00000309422 TPRP12270 2363 aaKnown RBP19.13■□□□□ 0.65
VEGFB-201ENST00000309422 TMEM150CB9EJG8 249 aa19.13■□□□□ 0.65
VEGFB-201ENST00000309422 CPNE3O75131 537 aaKnown RBP19.13■□□□□ 0.65
VEGFB-201ENST00000309422 ENO2P09104 434 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms