RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 DYRK3O43781 588 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 NTRK1P04629 796 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 EPHA2P29317 976 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 KRT20P35900 424 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 NUDT6P53370 316 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 ACVR1Q04771 509 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 FXNQ16595 210 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 SETMARQ53H47 684 aaPredicted RBP10.9□□□□□ -0.66
PTPN7-201ENST00000309017 CARD16Q5EG05 197 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 CPZQ66K79 652 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 GPR142Q7Z601 462 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 GPR149Q86SP6 731 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 RASAL3Q86YV0 1011 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 STX19Q8N4C7 294 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 UTP15Q8TED0 518 aaKnown RBP10.9□□□□□ -0.66
PTPN7-201ENST00000309017 CLPBQ9H078 707 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 FNIP2Q9P278 1114 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 UBA2Q9UBT2 640 aaPredicted RBP10.9□□□□□ -0.66
PTPN7-201ENST00000309017 RNF6Q9Y252 685 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 TESMINQ9Y4I5 508 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 F5H5T6 163 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 SLC28A1O00337 649 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 CPSF4O95639 269 aaKnown RBP10.9□□□□□ -0.67
PTPN7-201ENST00000309017 RETP07949 1114 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 GADD45AP24522 165 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 CTSKP43235 329 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 CLK3P49761 638 aaKnown RBP10.9□□□□□ -0.67
PTPN7-201ENST00000309017 PTPRRQ15256 657 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 SHQ1Q6PI26 577 aaKnown RBP10.9□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF621Q6ZSS3 439 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 SPATC1Q76KD6 591 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 GLB1L3Q8NCI6 653 aaPredicted RBP10.9□□□□□ -0.67
PTPN7-201ENST00000309017 SLC38A4Q969I6 547 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 ZFYVE19Q96K21 471 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF221Q9UK13 617 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 FBXO10Q9UK96 956 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 NOX1Q9Y5S8 564 aa10.9□□□□□ -0.67
PTPN7-201ENST00000309017 WASH4PA8MWX3 477 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 EPOP01588 193 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 FABP3P05413 133 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 COL6A1P12109 1028 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 AQP1P29972 269 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 DAPP51397 102 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 TAF1AQ15573 450 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF181Q2M3W8 571 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 RUNDC3AQ59EK9 446 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 AGMOQ6ZNB7 445 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 LINC00299Q6ZSB3 139 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 VTCN1Q7Z7D3 282 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 MMAAQ8IVH4 418 aaKnown RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 GPC2Q8N158 579 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 PYCR2Q96C36 320 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 DMRTB1Q96MA1 342 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 DUSP21Q9H596 190 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 EHD3Q9NZN3 535 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 A0A096LPI6 279 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 AGAP5A6NIR3 686 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 A8MV72 311 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 ITGB1P05556 798 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 ITGAMP11215 1152 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 C21orf33P30042 268 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 KRR1Q13601 381 aaKnown RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 MAD2L1BPQ15013 274 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 LRIT3Q3SXY7 679 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 VARS2Q5ST30 1063 aaKnown RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 UBE2UQ5VVX9 321 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 KIAA1614Q5VZ46 1190 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 RGL4Q8IZJ4 473 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 MDGA1Q8NFP4 955 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 KBTBD8Q8NFY9 601 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 SELENOMQ8WWX9 145 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 INPP5KQ9BT40 448 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 FAM126AQ9BYI3 521 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 CIPCQ9C0C6 399 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 PRDM5Q9NQX1 630 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 KCNH4Q9UQ05 1017 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 AP3M1Q9Y2T2 418 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 PRG3Q9Y2Y8 225 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 OR7A17O14581 309 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 PRAMEF11O60813 436 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 NBNO60934 754 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 CYP7B1O75881 506 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 VIPP01282 170 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 DNTTP04053 509 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 SPNP16150 400 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 EFNA1P20827 205 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 DNAJA1P31689 397 aaKnown RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 PPP3CCP48454 512 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF140P52738 457 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 RPS14P62263 151 aaKnown RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 RPP38P78345 283 aaKnown RBP10.89□□□□□ -0.67
PTPN7-201ENST00000309017 PHC1P78364 1004 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 TRIM60Q495X7 471 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 CTSL3PQ5NE16 218 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 PRSS48Q7RTY5 328 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 TEX26Q8N6G2 289 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 TXNDC15Q96J42 360 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 KCNC2Q96PR1 638 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 DEPDC7Q96QD5 511 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 KATNBL1Q9H079 304 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms