RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ZNF669Q96BR6 464 aaPredicted RBP19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 ABHD17AQ96GS6 310 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 SPRTNQ9H040 489 aaPredicted RBP19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 POLHQ9Y253 713 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 FARSAQ9Y285 508 aaKnown RBP19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 KLHL20Q9Y2M5 609 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 A0A1W2PPV9 198 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 CDC14CA4D256 554 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 PYCARD-AS1I3L0S3 204 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 J3QKU1 62 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 ESR1P03372 595 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 RAB40ALP0C0E4 278 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 MAGP20916 626 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 DHX34Q14147 1143 aaKnown RBP19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 TMED2Q15363 201 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 PTCHD3Q3KNS1 767 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 RNF187Q5TA31 235 aaPredicted RBP19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 FCRL6Q6DN72 434 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 ZNF549Q6P9A3 640 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 OTOAQ7RTW8 1153 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 SYVN1Q86TM6 617 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 C2orf73Q8N5S3 287 aaPredicted RBP19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 HMGCLL1Q8TB92 370 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 FAM136AQ96C01 138 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 TRIM55Q9BYV6 548 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 FAM117AQ9C073 453 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 DDX47Q9H0S4 455 aaKnown RBP19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 PLAC1Q9HBJ0 212 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 ENAMQ9NRM1 1142 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 TNRC6AQ8NDV7 1962 aaKnown RBP19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 FLNCQ14315 2725 aa19.09■□□□□ 0.65
PDZRN3-202ENST00000308537 SETXQ7Z333 2677 aaKnown RBP19.08■□□□□ 0.65
PDZRN3-202ENST00000308537 MAGEB16A2A368 324 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 ISM1B1AKI9 464 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 E7EQ34 232 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 KPNA5O15131 536 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 SLC28A2O43868 658 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 KIF5CO60282 957 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 USP1O94782 785 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 ERGP11308 486 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 PKMP14618 531 aaKnown RBP19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 CYP2A7P20853 494 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 ATP5DP30049 168 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 CLCN7P51798 805 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 PMS2P54278 862 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 ACSBG2Q5FVE4 666 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 SDCCAG8Q86SQ7 713 aaPredicted RBP19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 TAX1BP1Q86VP1 789 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 APLFQ8IW19 511 aaPredicted RBP19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 TMEM151BQ8IW70 566 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 ENDOVQ8N8Q3 282 aaKnown RBP19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 GBP5Q96PP8 586 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 NLNQ9BYT8 704 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 PCYOX1Q9UHG3 505 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 SERTAD3Q9UJW9 196 aa19.08■□□□□ 0.64
PDZRN3-202ENST00000308537 RPN2P04844 631 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 KLK3P07288 261 aaPredicted RBP19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 CBSLP0DN79 551 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 CBSP35520 551 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 YBX1P67809 324 aaKnown RBP19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 CTBP1Q13363 440 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 PTK6Q13882 451 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 MSS51Q4VC12 460 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 PAPD7Q5XG87 772 aaKnown RBP19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 ZNF470Q6ECI4 717 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 RHBDD2Q6NTF9 364 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 CASC4Q6P4E1 433 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 CREG2Q8IUH2 290 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 PPIL6Q8IXY8 311 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 OTUD6BQ8N6M0 293 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 RAD51AP1Q96B01 352 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 CLIP3Q96DZ5 547 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 ZNF285Q96NJ3 590 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 ZNF71Q9NQZ8 489 aaPredicted RBP19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 INTS10Q9NVR2 710 aaKnown RBP19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 TCFL5Q9UL49 500 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 PYCARDQ9ULZ3 195 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 KLK4Q9Y5K2 254 aa19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 MDC1Q14676 2089 aaKnown RBP19.07■□□□□ 0.64
PDZRN3-202ENST00000308537 ARHGEF33A8MVX0 844 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 H3BMM5 538 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 DNALI1O14645 258 aaPredicted RBP19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 TP73O15350 636 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 KDM1AO60341 852 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 NRP2O60462 931 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 CNOT3O75175 753 aaKnown RBP19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 BANF1O75531 89 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 KLF7O75840 302 aaPredicted RBP19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 DNAJB5O75953 348 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 OR2B3O76000 313 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 PDGFAP04085 211 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 PAMP19021 973 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 NR1D1P20393 614 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 ITGAXP20702 1163 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 PSMB5P28074 263 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 SLC1A2P43004 574 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 RPS15P62841 145 aaKnown RBP19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 TIAL1Q01085 375 aaKnown RBP eCLIP19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 NCF4Q15080 339 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms