RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SLC9B1Q4ZJI4 515 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 C6orf62Q9GZU0 229 aaPredicted RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 PAIP1Q9H074 479 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 AGO3Q9H9G7 860 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 CRTAC1Q9NQ79 661 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 ARRDC5A6NEK1 342 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 LGR5O75473 907 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 MANFP55145 182 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 CES3Q6UWW8 571 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 PIGXQ8TBF5 258 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 PLEKHO2Q8TD55 490 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 S100A16Q96FQ6 103 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 KMOO15229 486 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 YKT6O15498 198 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 DHX15O43143 795 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 BMP1P13497 986 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 GYS1P13807 737 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 KCNC1P48547 511 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 ABHD15Q6UXT9 468 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 ZFPM2Q8WW38 1151 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 PPP1R14AQ96A00 147 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 NXPE2Q96DL1 559 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 KCNC2Q96PR1 638 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 TTPALQ9BTX7 342 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 MVB12BQ9H7P6 319 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 SLAMF7Q9NQ25 335 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 NINJ2Q9NZG7 142 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 POMPQ9Y244 141 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 SOX15O60248 233 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 INMTO95050 263 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 DRD4P21917 467 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CDH13P55290 713 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 MTAPQ13126 283 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 E2F2Q14209 437 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CLVS2Q5SYC1 327 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 TYW3Q6IPR3 259 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 PLEKHG7Q6ZR37 379 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 RPLP0P6Q8NHW5 317 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 RNASE11Q8TAA1 199 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 CHTF18Q8WVB6 975 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 HAS1Q92839 578 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 AHCYL2Q96HN2 611 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 SMURF1Q9HCE7 757 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 OSGEPQ9NPF4 335 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 XPNPEP3Q9NQH7 507 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 BTN3A1O00481 513 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 SEPT4O43236 478 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 JRKO75564 520 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 METTL18O95568 372 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 HNRNPA1P09651 372 aaKnown RBP eCLIP3.94□□□□□ -1.78
USH2A-201ENST00000307340 SOAT1P35610 550 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CTSKP43235 329 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 GBX2P52951 348 aaPredicted RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 DSTNP60981 165 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 ZNF211Q13398 564 aaPredicted RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 DACT2Q5SW24 774 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 TCEAL6Q6IPX3 200 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 COL21A1Q96P44 957 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CBWD1Q9BRT8 395 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 BLOC1S4Q9NUP1 217 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 POLR2AP24928 1970 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 FAM240BA0A1B0GVZ2 78 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 LRRC72A6NJI9 287 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CXCR6O00574 342 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CDK4P11802 303 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 SCNN1BP51168 640 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 EMX2Q04743 252 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 RCAN2Q14206 197 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 OGFOD2Q6N063 350 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 LPCAT3Q6P1A2 487 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 OR5K1Q8NHB7 308 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 SGCDQ92629 289 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 SNAPC3Q92966 411 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 SLC47A1Q96FL8 570 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 DUSP9Q99956 384 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 CDHR5Q9HBB8 845 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 ACOT13Q9NPJ3 140 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 MGAT4BQ9UQ53 548 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 PCDHGA4Q9Y5G9 962 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 E5RJQ4 531 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 BTN3A3O00478 584 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 BCKDKO14874 412 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 ZNF682O95780 498 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CCNYL3P0C7X3 344 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 HTR1EP28566 365 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 EPHA5P54756 1037 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 TAS2R41P59536 307 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 DDX53Q86TM3 631 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 EPHX4Q8IUS5 362 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 BTN2A2Q8WVV5 523 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 NXNL1Q96CM4 212 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 PRODH2Q9UF12 536 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 EXOSC1Q9Y3B2 195 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 GBF1Q92538 1859 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CIB4A0PJX0 185 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CCRL2O00421 344 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CDK2AP1O14519 115 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 TLL1O43897 1013 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 SGPL1O95470 568 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 PPP3CBP16298 524 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms