RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 NFATC4Q14934 902 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 LARS2Q15031 903 aaKnown RBP12.4□□□□□ -0.42
USP38-201ENST00000307017 ELOA3BQ3SY89 546 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 UBXN11Q5T124 520 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 ZNF410Q86VK4 478 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 CCDC36Q8IYA8 594 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 PGAM4Q8N0Y7 254 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 ELOA3Q8NG57 546 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 OR2L2Q8NH16 312 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 TBC1D15Q8TC07 691 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 TRPM4Q8TD43 1214 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 TFAP2BQ92481 460 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 XRCC1P18887 633 aaPredicted RBP12.4□□□□□ -0.42
USP38-201ENST00000307017 SCARB2Q14108 478 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 SFT2D3Q587I9 215 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 COMMD4Q9H0A8 199 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 RHOJQ9H4E5 214 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 TIMMDC1Q9NPL8 285 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 PTBP2Q9UKA9 531 aaKnown RBP12.4□□□□□ -0.42
USP38-201ENST00000307017 XKP51811 444 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 SMIM11AP58511 58 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 PPP1R3AQ16821 1122 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 HSDL1Q3SXM5 330 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 CARD17Q5XLA6 110 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 KIF18BQ86Y91 864 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 PIGXQ8TBF5 258 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 OR8D1Q8WZ84 308 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 APOC1P02654 83 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 GLUD2P49448 558 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 UFM1P61960 85 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 ZACNQ401N2 412 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 TXNRD3NBQ6F5E7 133 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 OR4F3Q6IEY1 312 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 ZPBP2Q6X784 338 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 CEP68Q76N32 757 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 GPR142Q7Z601 462 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 AMIGO1Q86WK6 493 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 Q8N9G6 341 aaPredicted RBP12.4□□□□□ -0.42
USP38-201ENST00000307017 CANT1Q8WVQ1 401 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 SEC14L1Q92503 715 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 NSMCE3Q96MG7 304 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 MOCS1Q9NZB8 636 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 SLC27A6Q9Y2P4 619 aa12.4□□□□□ -0.42
USP38-201ENST00000307017 ABHD2P08910 425 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 ACRP10323 421 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 PDGFRLQ15198 375 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 USP43Q70EL4 1123 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 MCEMP1Q8IX19 187 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 OR6Q1Q8NGQ2 317 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 RFT1Q96AA3 541 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 S100PBPQ96BU1 408 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 TSPAN18Q96SJ8 248 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 AIF1LQ9BQI0 150 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 CCSER2Q9H7U1 834 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 MEAF6Q9HAF1 191 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 SMURF1Q9HCE7 757 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 GJD2Q9UKL4 321 aa12.4□□□□□ -0.43
USP38-201ENST00000307017 KANTRA0A1W2PQU2 76 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 KMOO15229 486 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 STT3AP46977 705 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 TMEM86AQ8N2M4 240 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 MTRRQ9UBK8 725 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 E7EQ34 232 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 CHST10O43529 356 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 LRCH4O75427 683 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 FARS2O95363 451 aaKnown RBP12.39□□□□□ -0.43
USP38-201ENST00000307017 PKMP14618 531 aaKnown RBP12.39□□□□□ -0.43
USP38-201ENST00000307017 ENGP17813 658 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ITIH1P19827 911 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ARFRP1Q13795 201 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 MED27Q6P2C8 311 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 JAGN1Q8N5M9 183 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 HM13Q8TCT9 377 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 CLP1Q92989 425 aaKnown RBP12.39□□□□□ -0.43
USP38-201ENST00000307017 HAVCR1Q96D42 359 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 OTUB2Q96DC9 234 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ADAD1Q96M93 576 aaKnown RBP12.39□□□□□ -0.43
USP38-201ENST00000307017 B4DGG1 531 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 VIPP01282 170 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ITGB5P18084 799 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 RAB27AP51159 221 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 FXYD6P3P58550 94 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 TEX44Q53QW1 395 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ZNF101Q8IZC7 436 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 COX18Q8N8Q8 333 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ZNF431Q8TF32 576 aaPredicted RBP12.39□□□□□ -0.43
USP38-201ENST00000307017 SLC39A8Q9C0K1 460 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 OR2AG1Q9H205 316 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 TMCO1Q9UM00 188 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 URADA6NGE7 173 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 TVP23AA6NH52 213 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ARL5CA6NH57 179 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 CEP76Q8TAP6 659 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 AKAP1Q92667 903 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP38-201ENST00000307017 TMBIM1Q969X1 311 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 IDI2Q9BXS1 227 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ABHD16BQ9H3Z7 469 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ADAP2Q9NPF8 381 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ABCB8Q9NUT2 735 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms