RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TAAR9Q96RI9 348 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CAB39LQ9H9S4 337 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 INTS7Q9NVH2 962 aaKnown RBP10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 OCIAD1Q9NX40 245 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 DKK4Q9UBT3 224 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SDK2Q58EX2 2172 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MDC1Q14676 2089 aaKnown RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 A0A1W2PNU3 283 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PMS2P1A4D2B8 440 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 POC1B-GALNT4F8VUJ3 575 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 GFYI3L273 518 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 POLR1CO15160 346 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 RIPK2O43353 540 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FAM155BO75949 473 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CCNDBP1O95273 360 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FKBP9O95302 570 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 C1QAP02745 245 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ENO2P09104 434 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FGF3P11487 239 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CCL4P13236 92 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 NELFEP18615 380 aaKnown RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 OAS2P29728 719 aaKnown RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 RPA3P35244 121 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ETV5P41161 510 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MSH2P43246 934 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SERPINB9P50453 376 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PNLIPRP1P54315 467 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 RAB10P61026 200 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MC2RQ01718 297 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ACY1Q03154 408 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TUBB3Q13509 450 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 GRB7Q14451 532 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 NAA25Q14CX7 972 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CCSMST1Q4G0I0 132 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TAF1BQ53T94 588 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FBXO38Q6PIJ6 1188 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CYHR1Q6ZMK1 362 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CLEC14AQ86T13 490 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TBC1D1Q86TI0 1168 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CEP97Q8IW35 865 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 C2orf73Q8N5S3 287 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 C19orf47Q8N9M1 422 aaKnown RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 UBLCP1Q8WVY7 318 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KLHL6Q8WZ60 621 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 USP7Q93009 1102 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PRR11Q96HE9 360 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC41A2Q96JW4 573 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CCDC138Q96M89 665 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TEFMQ96QE5 360 aaKnown RBP10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 OR2A14Q96R47 310 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 OR6C1Q96RD1 312 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PAFAH2Q99487 392 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PKP4Q99569 1192 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 NRTNQ99748 197 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ZPBPQ9BS86 351 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MCMBPQ9BTE3 642 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MENTQ9BUN1 341 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 DDA1Q9BW61 102 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FUT8Q9BYC5 575 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ASPSCR1Q9BZE9 553 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ANKZF1Q9H8Y5 726 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PARVBQ9HBI1 364 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PDE7BQ9NP56 450 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SPHK1Q9NYA1 384 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SEMA5BQ9P283 1151 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PCDHGA7Q9Y5G6 932 aa10.63□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KRT87PA6NCN2 255 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 NPEPPSL1A6NEC2 478 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC9B1P1A6NJY1 282 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CDRT15L2A8MXV6 281 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 NVLO15381 856 aaKnown RBP10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PHGDHO43175 533 aaKnown RBP10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PRAMEF10O60809 474 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC16A8O95907 504 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FAM153BP0C7A2 387 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 EBLN1P0CF75 366 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TPBGLP0DKB5 382 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ERGP11308 486 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ST6GAL1P15907 406 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CNTFP26441 200 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CD82P27701 267 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CRABP2P29373 138 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CMPK1P30085 196 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PEBP1P30086 187 aaKnown RBP10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC5A2P31639 672 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SERPINB8P50452 374 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PGGT1BP53609 377 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 AP1S2P56377 157 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 BMPR2Q13873 1038 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SF1Q15637 639 aaKnown RBP10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CYP2A13Q16696 494 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FAM153CQ494X1 144 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 UBAP2Q5T6F2 1119 aaKnown RBP10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 THEMIS2Q5TEJ8 643 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MROH9Q5TGP6 573 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CCDC91Q7Z6B0 441 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ADAMTSL2Q86TH1 951 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TRIM73Q86UV7 250 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PPP1R3BQ86XI6 285 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 RASGRP3Q8IV61 690 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms