RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PIEZO2Q9H5I5 2752 aa25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 POLHQ9Y253 713 aa25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 NFS1Q9Y697 457 aa25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 CFAP46Q8IYW2 2715 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 RORAP35398 523 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 CNSTQ6PJW8 725 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 SYVN1Q86TM6 617 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 CREG2Q8IUH2 290 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 FAM136AQ96C01 138 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 IL17FQ96PD4 163 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 DPH2Q9BQC3 489 aaPredicted RBP25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 PCMTD2Q9NV79 361 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 INTS7Q9NVH2 962 aaKnown RBP25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 CIDEBQ9UHD4 219 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 PYCARDQ9ULZ3 195 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 FARSAQ9Y285 508 aaKnown RBP25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 AP1M2Q9Y6Q5 423 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 FAM169AQ9Y6X4 670 aa25.49■■□□□ 1.67
CDKN2A-201ENST00000304494 ZNF749O43361 778 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 OR2B3O76000 313 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 MATN4O95460 622 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 PGAM1P18669 254 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 SLC1A2P43004 574 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 PTGIRP43119 386 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 BDKRB1P46663 353 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 CTBP1Q13363 440 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 TTLL9Q3SXZ7 439 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 DENND6AQ8IWF6 608 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 C2orf73Q8N5S3 287 aaPredicted RBP25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 GABPB2Q8TAK5 448 aaPredicted RBP25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 FAM167BQ9BTA0 163 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 CHST8Q9H2A9 424 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 FBXO6Q9NRD1 293 aaPredicted RBP25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 RUVBL2Q9Y230 463 aaKnown RBP25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 HEMK1Q9Y5R4 338 aaPredicted RBP25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 COMMD10Q9Y6G5 202 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 BOD1L1Q8NFC6 3051 aa25.48■■□□□ 1.67
CDKN2A-201ENST00000304494 CDC14CA4D256 554 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 FKBP9O95302 570 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 RAB40ALP0C0E4 278 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 PLA2G2AP14555 144 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 PAFAH1B1P43034 410 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 GABRA4P48169 554 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 SYTL1Q8IYJ3 562 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 KCNJ9Q92806 393 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 RUFY1Q96T51 708 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 NAT9Q9BTE0 207 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 SPATA7Q9P0W8 599 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 KLHL42Q9P2K6 505 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 PLCL2Q9UPR0 1127 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 KCNMB2Q9Y691 235 aa25.47■■□□□ 1.67
CDKN2A-201ENST00000304494 TTC4O95801 387 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 FURINP09958 794 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 MAGP20916 626 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 AGXTP21549 392 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 CLCN7P51798 805 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 DR1Q01658 176 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 SF1Q15637 639 aaKnown RBP25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 UGT8Q16880 541 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 DEFB110Q30KQ9 67 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 ACSBG2Q5FVE4 666 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 TAX1BP1Q86VP1 789 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 KLHL7Q8IXQ5 586 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 DNAJC22Q8N4W6 341 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 HMGCLL1Q8TB92 370 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 NLNQ9BYT8 704 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 FAM114A2Q9NRY5 505 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 GALPQ9UBC7 116 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 RNF14Q9UBS8 474 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 TSR3Q9UJK0 312 aaKnown RBP25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 FBXO5Q9UKT4 447 aa25.46■■□□□ 1.67
CDKN2A-201ENST00000304494 BSNQ9UPA5 3926 aa25.45■■□□□ 1.67
CDKN2A-201ENST00000304494 H3BMH7 237 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 CCDC188H7C350 402 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 SMAPO00193 183 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 ZSCAN9O15535 394 aaPredicted RBP25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 RPS18P62269 152 aaKnown RBP25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 DHX9Q08211 1270 aaKnown RBP25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 CRYMQ14894 314 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 MORF4L2Q15014 288 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 KLHL38Q2WGJ6 581 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 HSP90AA5PQ58FG0 334 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 TLDC1Q6P9B6 456 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 NEK10Q6ZWH5 1172 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 KCNMB4Q86W47 210 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 FAM20CQ8IXL6 584 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 THAP4Q8WY91 577 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 EBNA1BP2Q99848 306 aaKnown RBP25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 C17orf62Q9BQA9 187 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 IRAK4Q9NWZ3 460 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 SRPK3Q9UPE1 567 aa25.45■■□□□ 1.66
CDKN2A-201ENST00000304494 CCSMST1Q4G0I0 132 aa25.44■■□□□ 1.66
CDKN2A-201ENST00000304494 ZC3H12BQ5HYM0 836 aaKnown RBP25.44■■□□□ 1.66
CDKN2A-201ENST00000304494 SPANXN3Q5MJ09 141 aa25.44■■□□□ 1.66
CDKN2A-201ENST00000304494 ENDOVQ8N8Q3 282 aaKnown RBP25.44■■□□□ 1.66
CDKN2A-201ENST00000304494 LMNTD1Q8N9Z9 388 aa25.44■■□□□ 1.66
CDKN2A-201ENST00000304494 SPRTNQ9H040 489 aaPredicted RBP25.44■■□□□ 1.66
CDKN2A-201ENST00000304494 SNX7Q9UNH6 387 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms