RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 UQCRBP14927 111 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 HSD3B2P26439 372 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 HTR1EP28566 365 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 P2RY2P41231 377 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 HNF4AP41235 474 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 GSK3BP49841 420 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 HNRNPFP52597 415 aaKnown RBP18.9■□□□□ 0.62
HOXC4-201ENST00000303406 PNLIPRP1P54315 467 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 HYAL1Q12794 435 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 ABRQ12979 859 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 INPP5AQ14642 412 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 AASDHQ4L235 1098 aaPredicted RBP18.9■□□□□ 0.62
HOXC4-201ENST00000303406 FRG2Q64ET8 278 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 AGTRAPQ6RW13 159 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 DLEU7Q6UYE1 221 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 THOC6Q86W42 341 aaKnown RBP18.9■□□□□ 0.62
HOXC4-201ENST00000303406 MMAAQ8IVH4 418 aaKnown RBP18.9■□□□□ 0.62
HOXC4-201ENST00000303406 KIAA2013Q8IYS2 634 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 LIX1Q8N485 282 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 ICA1LQ8NDH6 482 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 OR8J3Q8NGG0 315 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 FRG2BQ96QU4 278 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 ALG2Q9H553 416 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 SNX13Q9Y5W8 968 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 KANSL1LA0AUZ9 987 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 H3BM21 787 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 RNASEH2AO75792 299 aaKnown RBP18.89■□□□□ 0.61
HOXC4-201ENST00000303406 EPHX1P07099 455 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 ATP6V1B2P21281 511 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 TEAD1P28347 426 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 CASP2P42575 452 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 CLDN8P56748 225 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 LIPEQ05469 1076 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 CHIT1Q13231 466 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 AGERQ15109 404 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 GRAMD1BQ3KR37 738 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 ATAT1Q5SQI0 421 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 PIP5KL1Q5T9C9 394 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 GRHL2Q6ISB3 625 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 NANOGP8Q6NSW7 305 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 SLC2A7Q6PXP3 512 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 SFTPA1Q8IWL2 248 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 HM13Q8TCT9 377 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 SLC13A3Q8WWT9 602 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 SLCO4A1Q96BD0 722 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 COX14Q96I36 57 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 MYADMQ96S97 322 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 PLA2G2FQ9BZM2 168 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 DPEP2Q9H4A9 486 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 NANOGQ9H9S0 305 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 SLC28A3Q9HAS3 691 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 CCM2LQ9NUG4 571 aaPredicted RBP18.89■□□□□ 0.61
HOXC4-201ENST00000303406 ZNHIT2Q9UHR6 403 aa18.89■□□□□ 0.61
HOXC4-201ENST00000303406 PRRC2BQ5JSZ5 2229 aaKnown RBP18.89■□□□□ 0.61
HOXC4-201ENST00000303406 ZFC3H1O60293 1989 aaKnown RBP18.88■□□□□ 0.61
HOXC4-201ENST00000303406 MKI67P46013 3256 aaKnown RBP18.88■□□□□ 0.61
HOXC4-201ENST00000303406 MAGEA13PA6NCF6 341 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 H0YIV9 168 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 CLGNO14967 610 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 PRAMEF4O60810 478 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 GPIP06744 558 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 UMPSP11172 480 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 BCKDHAP12694 445 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 ITPKAP23677 461 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 HALP42357 657 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 PREPP48147 710 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 HSPA13P48723 471 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 ATXN3P54252 364 aaPredicted RBP18.88■□□□□ 0.61
HOXC4-201ENST00000303406 AQP4P55087 323 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 RPS14P62263 151 aaKnown RBP18.88■□□□□ 0.61
HOXC4-201ENST00000303406 IRF8Q02556 426 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 ITPRIPL2Q3MIP1 535 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 SGO1Q5FBB7 561 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 PRAMEF9Q5VWM5 478 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 EGFLAMQ63HQ2 1017 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 MSANTD1Q6ZTZ1 278 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 PROSER1Q86XN7 944 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 DNAJB14Q8TBM8 379 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 GATA6Q92908 595 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 PYCR2Q96C36 320 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 CHFRQ96EP1 664 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 SLC45A3Q96JT2 553 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 PKP4Q99569 1192 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 CGREF1Q99674 301 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 KCTD14Q9BQ13 255 aaPredicted RBP18.88■□□□□ 0.61
HOXC4-201ENST00000303406 ATG10Q9H0Y0 220 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 RSPH9Q9H1X1 276 aaPredicted RBP18.88■□□□□ 0.61
HOXC4-201ENST00000303406 OR2AG1Q9H205 316 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 VCXQ9H320 206 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 GULP1Q9UBP9 304 aa18.88■□□□□ 0.61
HOXC4-201ENST00000303406 ARPC2O15144 300 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 KCNH1O95259 989 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 C1orf105O95561 183 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 ADH1BP00325 375 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 IMPA1P29218 277 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 CNTN1Q12860 1018 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 GRM2Q14416 872 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 PTGR1Q14914 329 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 C10orf62Q5T681 223 aaPredicted RBP18.87■□□□□ 0.61
HOXC4-201ENST00000303406 NAIF1Q69YI7 327 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms