RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 FAM86C2PA6NEL3 165 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 TRIM38O00635 465 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SASH3O75995 380 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 IFNA6P05013 189 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ALPPP05187 535 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 GABRB2P47870 512 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 EIF2B2P49770 351 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 PCBP1Q15365 356 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 PRAMEF13Q5VWM6 474 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CIB1Q99828 191 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 GSDMCQ9BYG8 508 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ZBTB20Q9HC78 741 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 PIGVQ9NUD9 493 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 NOL4O94818 638 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CHRNB2P17787 502 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ACVR2AP27037 513 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 TARDBPQ13148 414 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 INAVAQ3KP66 663 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SULT1C3Q6IMI6 304 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 TRMT10BQ6PF06 316 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 PJA1Q8NG27 643 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CAVIN3Q969G5 261 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 IFT80Q9P2H3 777 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 MTRRQ9UBK8 725 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 MAFFQ9ULX9 164 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 EDDM13A0A1B0GTR0 161 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ENTPD5O75356 428 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 BEST1O76090 585 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 FABP3P05413 133 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF806P0C7X5 589 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 KIR3DL1P43629 444 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 OR4F3Q6IEY1 312 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 KIAA1211LQ6NV74 962 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CXXC5Q7LFL8 322 aaKnown RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 OR1F2PQ96R84 312 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 AGXT2Q9BYV1 514 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 SLC25A51Q9H1U9 297 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 KIDINS220Q9ULH0 1771 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 A0A1W2PRB8 838 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 HAS3O00219 553 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 WWP2O00308 870 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ECDO95905 644 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CBX5P45973 191 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CCR8P51685 355 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 MYBPC3Q14896 1274 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 C6orf52Q5T4I8 152 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ZC3H14Q6PJT7 736 aaKnown RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ARMC10Q8N2F6 343 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 PNPLA1Q8N8W4 532 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 PCDH19Q8TAB3 1148 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 IRGQQ8WZA9 623 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 SSR3Q9UNL2 185 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ROBO1Q9Y6N7 1651 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CLPXO76031 633 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 PSMG1O95456 288 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CDH1P12830 882 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 BBS12Q6ZW61 710 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 POC5Q8NA72 575 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 OR4C6Q8NH72 309 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 KCNC2Q96PR1 638 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 LINC00597Q9H2U6 94 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 EHD1Q9H4M9 534 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 HMG20AQ9NP66 347 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 LOC730098B7Z3J9 87 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 SCDO00767 359 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 AP2A1O95782 977 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 S100GP29377 79 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 AP2S1P53680 142 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ZCCHC12Q6PEW1 402 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF613Q6PF04 617 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 APCDD1Q8J025 514 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 SUSD3Q96L08 255 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CPEB1Q9BZB8 566 aaKnown RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 GDAP2Q9NXN4 497 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CD207Q9UJ71 328 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 RPH3AQ9Y2J0 694 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 A0A1B0GW55 424 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 SOD2P04179 222 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 DUX4L2P0CJ85 424 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 DUX4L3P0CJ86 424 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 DUX4L4P0CJ87 422 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 DUX4L5P0CJ88 424 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 DUX4L6P0CJ89 424 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 DUX4L7P0CJ90 424 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 UROSP10746 265 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 PGAM2P15259 253 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CLDN2P57739 230 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 LMAN2Q12907 356 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 AAK1Q2M2I8 961 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ARL13AQ5H913 290 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 SPIN3Q5JUX0 258 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 TPGS2Q68CL5 300 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CCDC116Q8IYX3 515 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 FBXW8Q8N3Y1 598 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 TFGQ92734 400 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ADAD1Q96M93 576 aaKnown RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 DUX4Q9UBX2 424 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 H7BY64 318 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 GRID2O43424 1007 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 MMP8P22894 467 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms