RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 POLR2J2Q9GZM3 115 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ACTR6Q9GZN1 396 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 PDZD7Q9H5P4 517 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF358Q9NW07 568 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 POLR3BQ9NW08 1133 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 MAB21L2Q9Y586 359 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 FAM149AA5PLN7 773 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 POP4O95707 220 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ATP5A1P25705 553 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 NMBRP28336 390 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 GRK6P43250 576 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 CDH13P55290 713 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 NPTX1Q15818 432 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ANKRD26P1Q6NSI1 321 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 CES5AQ6NT32 575 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 GALNT13Q8IUC8 556 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 OR2L3Q8NG85 312 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 OR10G2Q8NGC3 310 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 CERKQ8TCT0 537 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 XAGE5Q8WWM1 108 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ISOC1Q96CN7 298 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 FBXW11Q9UKB1 542 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 LOC100130705A0A1B0GUX0 176 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 NOTOA8MTQ0 251 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 hCG_2039718K7EN88 272 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 PENKP01210 267 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 HLA-DPB1P04440 258 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 PDHA2P29803 388 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 TXNL4AP83876 142 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF404Q494X3 552 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ANKRD22Q5VYY1 191 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 TATDN1Q6P1N9 297 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 MSANTD2Q6P1R3 559 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 RASGEF1AQ8N9B8 481 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 PIGKQ92643 395 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 PWWP2AQ96N64 755 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 EQTNQ9NQ60 294 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 NR2E1Q9Y466 385 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 GBE1Q04446 702 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 CBFBQ13951 182 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 HNRNPDQ14103 355 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 KIAA1614Q5VZ46 1190 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF782Q6ZMW2 699 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 CYP4X1Q8N118 509 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 FSTL5Q8N475 847 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 JOSD2Q8TAC2 188 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 MMP3P08254 477 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 IDSP22304 550 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 FSHRP23945 695 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 GNA12Q03113 381 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 GPR33Q49SQ1 333 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ABHD13Q7L211 337 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 MOXD2PA6NHM9 499 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ARL6IP5O75915 188 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 SCGNO76038 276 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 RASAL1O95294 804 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 PIRTP0C851 137 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 UNGP13051 313 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 TACR2P21452 398 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 SLC18A2Q05940 514 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 DUOXA1Q1HG43 343 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 SH3D19Q5HYK7 790 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 COLEC12Q5KU26 742 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 HDDC3Q8N4P3 179 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 COX18Q8N8Q8 333 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 OR5T3Q8NGG3 340 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 TMEM39AQ9NV64 488 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 NKIRAS2Q9NYR9 191 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 EIF2B4Q9UI10 523 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 CLEC4AQ9UMR7 237 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 RNF6Q9Y252 685 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 SCN2BO60939 215 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 PIAS1O75925 651 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 TFPIP10646 304 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ATXN1P54253 815 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 NRG1Q02297 640 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 EIF2S3LQ2VIR3 472 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 HSD17B12Q53GQ0 312 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 FAM76BQ5HYJ3 339 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 TMEM214Q6NUQ4 689 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 EXOSC8Q96B26 276 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 MTFR1LQ9H019 292 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 HHATLQ9HCP6 504 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 C14orf166Q9Y224 244 aaKnown RBP7.49□□□□□ -1.21
SF3B3-201ENST00000302516 PHLPP1O60346 1717 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 DCLK1O15075 740 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 HCN1O60741 890 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 SLITRK5O94991 958 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MATN4O95460 622 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF20P17024 532 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CHRNB2P17787 502 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 RHBDL3P58872 404 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CHIT1Q13231 466 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 SPERTQ8NA61 448 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CHST4Q8NCG5 386 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 OR56A1Q8NGH5 318 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MIPEPQ99797 713 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TRPV4Q9HBA0 871 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 PCDHGB5Q9Y5G0 923 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms