RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SSX4O60224 188 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 PRSS23O95084 383 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 NDST3O95803 873 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 FABP3P05413 133 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 KCNE1P15382 129 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 BMPR1AP36894 532 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 DGKEP52429 567 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF45Q02386 682 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 MAD2L1Q13257 205 aaPredicted RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 CARD16Q5EG05 197 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 PDE12Q6L8Q7 609 aaKnown RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 MSANTD2Q6P1R3 559 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 AFTPHQ6ULP2 937 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF517Q6ZMY9 492 aaPredicted RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 GDPD3Q7L5L3 318 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 TRIM48Q8IWZ4 208 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 PHOX2BQ99453 314 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 CINPQ9BW66 212 aaPredicted RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 ARNT2Q9HBZ2 717 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 ACTL7AQ9Y615 435 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 CTDSP2O14595 271 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 STX16O14662 325 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 PTGESO14684 152 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 GPR39O43194 453 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 TLL1O43897 1013 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 POU2F1P14859 743 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 OGNP20774 298 aaKnown RBP11.15□□□□□ -0.62
TRUB1-201ENST00000298746 DAPP51397 102 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 CBX2Q14781 532 aaPredicted RBP11.15□□□□□ -0.62
TRUB1-201ENST00000298746 BCL7AQ4VC05 210 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 ATAD3CQ5T2N8 411 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 ALKAL1Q6UXT8 129 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 PRSS48Q7RTY5 328 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 YIPF6Q96EC8 236 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 TRNT1Q96Q11 434 aaKnown RBP11.15□□□□□ -0.62
TRUB1-201ENST00000298746 BCL7BQ9BQE9 202 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 TAS2R9Q9NYW1 312 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 FAM8A1Q9UBU6 413 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 PCDHGC4Q9Y5F7 938 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 PRRC2BQ5JSZ5 2229 aaKnown RBP11.15□□□□□ -0.62
TRUB1-201ENST00000298746 COL1A2P08123 1366 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 MROH6A6NGR9 719 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 CPNE3O75131 537 aaKnown RBP11.15□□□□□ -0.62
TRUB1-201ENST00000298746 IL6P05231 212 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 STSP08842 583 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 IFI30P13284 250 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 TUFMP49411 452 aaKnown RBP11.15□□□□□ -0.62
TRUB1-201ENST00000298746 PGFP49763 221 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 MAD2L1BPQ15013 274 aaPredicted RBP11.15□□□□□ -0.62
TRUB1-201ENST00000298746 TYSND1Q2T9J0 566 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 XKR7Q5GH72 579 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 VARS2Q5ST30 1063 aaKnown RBP11.15□□□□□ -0.62
TRUB1-201ENST00000298746 CPZQ66K79 652 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 NRARPQ7Z6K4 114 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 PJA1Q8NG27 643 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 TRIM63Q969Q1 353 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 PANX1Q96RD7 426 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF382Q96SR6 550 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 DUSP21Q9H596 190 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 TIGARQ9NQ88 270 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 AASDHPPTQ9NRN7 309 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 VNN3Q9NY84 501 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 TMEFF2Q9UIK5 374 aaPredicted RBP11.15□□□□□ -0.62
TRUB1-201ENST00000298746 KCNH4Q9UQ05 1017 aa11.15□□□□□ -0.62
TRUB1-201ENST00000298746 TNPO3Q9Y5L0 923 aaKnown RBP11.15□□□□□ -0.62
TRUB1-201ENST00000298746 SLC12A8A0AV02 714 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 HAT1O14929 419 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 SLC16A6O15403 523 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 CSF2P04141 144 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 CHRM5P08912 532 aaPredicted RBP11.15□□□□□ -0.63
TRUB1-201ENST00000298746 CHRNB1P11230 501 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 DNAJA1P31689 397 aaKnown RBP11.15□□□□□ -0.63
TRUB1-201ENST00000298746 KRT6CP48668 564 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 MXD1Q05195 221 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 PRAMEF19Q5SWL8 479 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 PSAPL1Q6NUJ1 521 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 PNCKQ6P2M8 343 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 SELENOMQ8WWX9 145 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 GPR63Q9BZJ6 419 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 TNKS2Q9H2K2 1166 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 ELOVL6Q9H5J4 265 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 CCDC177Q9NQR7 707 aaPredicted RBP11.15□□□□□ -0.63
TRUB1-201ENST00000298746 SATB2Q9UPW6 733 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 VPS9D1Q9Y2B5 631 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 GPSM3Q9Y4H4 160 aa11.15□□□□□ -0.63
TRUB1-201ENST00000298746 UPK3BL1B0FP48 263 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 UPK3BL2E5RIL1 263 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 M0R129 80 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 ARNTLO00327 626 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 IFRD1O00458 451 aaPredicted RBP11.14□□□□□ -0.63
TRUB1-201ENST00000298746 AREL1O15033 823 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
TRUB1-201ENST00000298746 B3GALT4O96024 378 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 MMP3P08254 477 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 RGS4P49798 205 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 CASP9P55211 416 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 PIK3R6Q5UE93 754 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 DEPDC4Q8N2C3 294 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 LINC01465Q8N7H1 131 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 IPCEF1Q8WWN9 437 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms