RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 FAM9CQ8IZT9 166 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 GALNT15Q8N3T1 639 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 TNIP2Q8NFZ5 429 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 ITFG1Q8TB96 612 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 BPIFB1Q8TDL5 484 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 NCSTNQ92542 709 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 CMTM7Q96FZ5 175 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 SH3GL1Q99961 368 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 THUMPD3Q9BV44 507 aaKnown RBP23.34■■□□□ 1.33
TRIM54-201ENST00000296098 ADI1Q9BV57 179 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 FAM8A1Q9UBU6 413 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 MYRFQ9Y2G1 1151 aa23.34■■□□□ 1.33
TRIM54-201ENST00000296098 C16orf96A6NNT2 1141 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 OR6B1O95007 311 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 H6PDO95479 791 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 SRPRAP08240 638 aaKnown RBP23.33■■□□□ 1.33
TRIM54-201ENST00000296098 MAPK1P28482 360 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 IRS1P35568 1242 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 MMP12P39900 470 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 DGKGP49619 791 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 NEK2P51955 445 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 CLDN8P56748 225 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 MAP7Q14244 749 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 CBX2Q14781 532 aaPredicted RBP23.33■■□□□ 1.33
TRIM54-201ENST00000296098 ADRM1Q16186 407 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 LDLRAP1Q5SW96 308 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 BTN2A2Q8WVV5 523 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 BADQ92934 168 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 RMND5BQ96G75 393 aaPredicted RBP23.33■■□□□ 1.33
TRIM54-201ENST00000296098 VPS35Q96QK1 796 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 SLC25A37Q9NYZ2 338 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 FBXO10Q9UK96 956 aa23.33■■□□□ 1.33
TRIM54-201ENST00000296098 EI24O14681 340 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 GSTA4O15217 222 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 ASLP04424 464 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 CYP17A1P05093 508 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 HALP42357 657 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 VASPP50552 380 aaPredicted RBP23.33■■□□□ 1.32
TRIM54-201ENST00000296098 UBE3AQ05086 875 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 KCNC3Q14003 757 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 TECPR1Q7Z6L1 1165 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 RIMKLAQ8IXN7 391 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 FAM47BQ8NA70 645 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 ZNF548Q8NEK5 533 aaPredicted RBP23.33■■□□□ 1.32
TRIM54-201ENST00000296098 TSPAN14Q8NG11 270 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 DNAJB8Q8NHS0 232 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 HCAR2Q8TDS4 363 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 VPS50Q96JG6 964 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 HAUS8Q9BT25 410 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 ATG10Q9H0Y0 220 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 AP3M1Q9Y2T2 418 aa23.33■■□□□ 1.32
TRIM54-201ENST00000296098 A0A1B0GTW7 788 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 H3BNH8 94 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 ELFN1P0C7U0 828 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 ADH5P11766 374 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 NELFEP18615 380 aaKnown RBP23.32■■□□□ 1.32
TRIM54-201ENST00000296098 MAP4P27816 1152 aaKnown RBP23.32■■□□□ 1.32
TRIM54-201ENST00000296098 NR1H2P55055 460 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 PFN3P60673 137 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 MERTKQ12866 999 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 FAM98BQ52LJ0 330 aaKnown RBP23.32■■□□□ 1.32
TRIM54-201ENST00000296098 TMEM240Q5SV17 173 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 FRG2Q64ET8 278 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 ZNF366Q8N895 744 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 OR10A6Q8NH74 314 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 WFIKKN2Q8TEU8 576 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 FRG2BQ96QU4 278 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 FAM83CQ9BQN1 747 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 BDH2Q9BUT1 245 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 TRIM4Q9C037 500 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 IKZF5Q9H5V7 419 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 OLAHQ9NV23 265 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 TMED5Q9Y3A6 229 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 TMEM202A6NGA9 273 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 NPIPB8E9PQR5 432 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 ZNF197O14709 1029 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 AREL1O15033 823 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 TSPAN6O43657 245 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 PRAMEF4O60810 478 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 JUPP14923 745 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 CHIT1Q13231 466 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 RUNDC3AQ59EK9 446 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 TCEAL5Q5H9L2 206 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 PRAMEF9Q5VWM5 478 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 ERAP2Q6P179 960 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 CYP2U1Q7Z449 544 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 ZNF784Q8NCA9 323 aaPredicted RBP23.32■■□□□ 1.32
TRIM54-201ENST00000296098 FIG4Q92562 907 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 GLYATL1Q969I3 302 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 GORASP2Q9H8Y8 452 aa23.32■■□□□ 1.32
TRIM54-201ENST00000296098 TRBV5-3A0A0A0MS03 114 aa23.31■■□□□ 1.32
TRIM54-201ENST00000296098 SERTM1A2A2V5 107 aa23.31■■□□□ 1.32
TRIM54-201ENST00000296098 ARHGEF33A8MVX0 844 aa23.31■■□□□ 1.32
TRIM54-201ENST00000296098 PSIP1O75475 530 aaKnown RBP23.31■■□□□ 1.32
TRIM54-201ENST00000296098 CISD3P0C7P0 127 aa23.31■■□□□ 1.32
TRIM54-201ENST00000296098 RAP2AP10114 183 aa23.31■■□□□ 1.32
TRIM54-201ENST00000296098 SDC1P18827 310 aa23.31■■□□□ 1.32
TRIM54-201ENST00000296098 MYF6P23409 242 aa23.31■■□□□ 1.32
TRIM54-201ENST00000296098 S100A3P33764 101 aa23.31■■□□□ 1.32
TRIM54-201ENST00000296098 ACOX1Q15067 660 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms