RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 LINC01555Q8NAE3 123 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 CFAP61Q8NHU2 1237 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 LKAAEAR1Q8TD35 194 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 ASZ1Q8WWH4 475 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 MENTQ9BUN1 341 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 CARD6Q9BX69 1037 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 TSSK1BQ9BXA7 367 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 SLC29A3Q9BZD2 475 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 CASS4Q9NQ75 786 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 RAB6BQ9NRW1 208 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 PLEKHB1Q9UF11 243 aaPredicted RBP18.87■□□□□ 0.61
CXCL3-201ENST00000296026 CIDEBQ9UHD4 219 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 TCAF1Q9Y4C2 921 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 SNRNP200O75643 2136 aaKnown RBP18.86■□□□□ 0.61
CXCL3-201ENST00000296026 MASP2O00187 686 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 GPC4O75487 556 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 RPN2P04844 631 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 ETS1P14921 441 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 CD9P21926 228 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 ALAS2P22557 587 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 MYBPC3Q14896 1274 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 EIF2S3LQ2VIR3 472 aaKnown RBP18.86■□□□□ 0.61
CXCL3-201ENST00000296026 PLEKHN1Q494U1 663 aaPredicted RBP18.86■□□□□ 0.61
CXCL3-201ENST00000296026 HIST2H2BCQ6DN03 193 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 NLRP9Q7RTR0 991 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 PPP1R32Q7Z5V6 425 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 LDB1Q86U70 411 aaPredicted RBP18.86■□□□□ 0.61
CXCL3-201ENST00000296026 TMEM151BQ8IW70 566 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 C2orf73Q8N5S3 287 aaPredicted RBP18.86■□□□□ 0.61
CXCL3-201ENST00000296026 C1orf54Q8WWF1 131 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 C19orf60Q96EN9 201 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 FRMD8P1Q9BZ68 369 aaPredicted RBP18.86■□□□□ 0.61
CXCL3-201ENST00000296026 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.86■□□□□ 0.61
CXCL3-201ENST00000296026 ANAPC5Q9UJX4 755 aa18.86■□□□□ 0.61
CXCL3-201ENST00000296026 KRT86O43790 486 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 ALPPP05187 535 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 APOA4P06727 396 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 UMODP07911 640 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 SNX1Q13596 522 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 GRB7Q14451 532 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 UNC5DQ6UXZ4 953 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 TTLL10Q6ZVT0 673 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 TAX1BP1Q86VP1 789 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 MCATQ8IVS2 390 aaKnown RBP18.85■□□□□ 0.61
CXCL3-201ENST00000296026 DCUN1D3Q8IWE4 304 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 IQCKQ8N0W5 287 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 KRT222Q8N1A0 295 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 DLG3Q92796 817 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 SLC22A18Q96BI1 424 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 IL17FQ96PD4 163 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 ZNF552Q9H707 407 aaPredicted RBP18.85■□□□□ 0.61
CXCL3-201ENST00000296026 SLC22A11Q9NSA0 550 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 CUEDC1Q9NWM3 386 aaPredicted RBP18.85■□□□□ 0.61
CXCL3-201ENST00000296026 B3GNT3Q9Y2A9 372 aa18.85■□□□□ 0.61
CXCL3-201ENST00000296026 UTP20O75691 2785 aaKnown RBP18.84■□□□□ 0.61
CXCL3-201ENST00000296026 KLHL41O60662 606 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 S1PR4O95977 384 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 APRTP07741 180 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 RNF224P0DH78 156 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 AOAHP28039 575 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 GCGRP47871 477 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 ARSFP54793 590 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 CYP2A13Q16696 494 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 AARS2Q5JTZ9 985 aaKnown RBP18.84■□□□□ 0.61
CXCL3-201ENST00000296026 IGFL3Q6UXB1 125 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 SLC13A5Q86YT5 568 aaPredicted RBP18.84■□□□□ 0.61
CXCL3-201ENST00000296026 RNF10Q8N5U6 811 aaKnown RBP18.84■□□□□ 0.61
CXCL3-201ENST00000296026 PPHLN1Q8NEY8 458 aaKnown RBP18.84■□□□□ 0.61
CXCL3-201ENST00000296026 OR2L8Q8NGY9 312 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 PRR7Q8TB68 274 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 PEX13Q92968 403 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 SNRNP40Q96DI7 357 aaKnown RBP18.84■□□□□ 0.61
CXCL3-201ENST00000296026 CHRAC1Q9NRG0 131 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 CATSPERZQ9NTU4 200 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 INTS7Q9NVH2 962 aaKnown RBP18.84■□□□□ 0.61
CXCL3-201ENST00000296026 MARCH4Q9P2E8 410 aaPredicted RBP18.84■□□□□ 0.61
CXCL3-201ENST00000296026 SLC39A10Q9ULF5 831 aa18.84■□□□□ 0.61
CXCL3-201ENST00000296026 A0A1B0GX78 115 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 AGPSO00116 658 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 PRMT5O14744 637 aaPredicted RBP18.83■□□□□ 0.6
CXCL3-201ENST00000296026 IPO13O94829 963 aaKnown RBP18.83■□□□□ 0.6
CXCL3-201ENST00000296026 SLCO2B1O94956 709 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 ITGAXP20702 1163 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 GRIA3P42263 894 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 SOX8P57073 446 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 TMED2Q15363 201 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 SF1Q15637 639 aaKnown RBP18.83■□□□□ 0.6
CXCL3-201ENST00000296026 FCRL6Q6DN72 434 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 CISD2Q8N5K1 135 aaKnown RBP18.83■□□□□ 0.6
CXCL3-201ENST00000296026 CCDC89Q8N998 374 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 DENND1AQ8TEH3 1009 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 ATP13A2Q9NQ11 1180 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 ASF1BQ9NVP2 202 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 PAK5Q9P286 719 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 ESPL1Q14674 2120 aa18.83■□□□□ 0.6
CXCL3-201ENST00000296026 RASGRF2O14827 1237 aa18.82■□□□□ 0.6
CXCL3-201ENST00000296026 CD3EAPO15446 510 aaKnown RBP18.82■□□□□ 0.6
CXCL3-201ENST00000296026 TTPAP49638 278 aa18.82■□□□□ 0.6
CXCL3-201ENST00000296026 NR6A1Q15406 480 aa18.82■□□□□ 0.6
CXCL3-201ENST00000296026 ZC3H12BQ5HYM0 836 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms