RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 LAMA5O15230 3695 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 A0A0J9YY10 115 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 ST8SIA5O15466 376 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 HCRTR1O43613 425 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 SLC28A2O43868 658 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 ITGB2P05107 769 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CTSBP07858 339 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 FURINP09958 794 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CHRM3P20309 590 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 NR1D1P20393 614 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 MAGP20916 626 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 SLC1A2P43004 574 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 FNTAP49354 379 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 MRPS25P82663 173 aaKnown RBP9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CDK16Q00536 496 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CHAF1BQ13112 559 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CTBP1Q13363 440 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CUL1Q13616 776 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 MAP7Q14244 749 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 ZIC1Q15915 447 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 BBS9Q3SYG4 887 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 ANKRD20A4Q4UJ75 823 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 DNAJC21Q5F1R6 531 aaKnown RBP9.44□□□□□ -0.9
CCDC58-201ENST00000291458 IZUMO3Q5VZ72 239 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 LCN10Q6JVE6 187 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 NEPROQ6NW34 567 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 SDCCAG8Q86SQ7 713 aaPredicted RBP9.44□□□□□ -0.9
CCDC58-201ENST00000291458 ZNF605Q86T29 641 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 PTRH1Q86Y79 214 aaKnown RBP9.44□□□□□ -0.9
CCDC58-201ENST00000291458 AGGF1Q8N302 714 aaeCLIP9.44□□□□□ -0.9
CCDC58-201ENST00000291458 ACTRT1Q8TDG2 376 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 LPGAT1Q92604 370 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CFAP36Q96G28 342 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 OR2A14Q96R47 310 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 EFHD1Q9BUP0 239 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CARD6Q9BX69 1037 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CHST8Q9H2A9 424 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 ACTR5Q9H9F9 607 aaPredicted RBP9.44□□□□□ -0.9
CCDC58-201ENST00000291458 XAB2Q9HCS7 855 aaKnown RBP9.44□□□□□ -0.9
CCDC58-201ENST00000291458 FAM60AQ9NP50 221 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 C20orf96Q9NUD7 363 aaPredicted RBP9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.44□□□□□ -0.9
CCDC58-201ENST00000291458 SEMA5BQ9P283 1151 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 SLC17A6Q9P2U8 582 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 GALPQ9UBC7 116 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 POLG2Q9UHN1 485 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 PADI1Q9ULC6 663 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CDYLQ9Y232 598 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 TNRC6AQ8NDV7 1962 aaKnown RBP9.44□□□□□ -0.9
CCDC58-201ENST00000291458 CCDC88CQ9P219 2028 aa9.44□□□□□ -0.9
CCDC58-201ENST00000291458 SDR42E2A6NKP2 422 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 E7EQ34 232 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 PFDN6O15212 129 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 KDM1AO60341 852 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 NRP2O60462 931 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 GPC4O75487 556 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 MT-ND3P03897 115 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 RPN2P04844 631 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 PLA2G2AP14555 144 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 TCP1P17987 556 aaKnown RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 OGNP20774 298 aaKnown RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 RPS3P23396 243 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 MAGEA6P43360 314 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 CCR10P46092 362 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 RAB28P51157 221 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 ITGA1P56199 1179 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 MC1RQ01726 317 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 PLOD1Q02809 727 aaPredicted RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 KCNAB2Q13303 367 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 IL10RAQ13651 578 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 TYSND1Q2T9J0 566 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 RNF187Q5TA31 235 aaPredicted RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 RNASEH2BQ5TBB1 312 aaKnown RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 CENPUQ71F23 418 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 CILP2Q8IUL8 1156 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 PPIL6Q8IXY8 311 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 SYTL1Q8IYJ3 562 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 ZBTB2Q8N680 514 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 ZNF655Q8N720 491 aaPredicted RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 LINC01555Q8NAE3 123 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 SLC38A9Q8NBW4 561 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 LSM14AQ8ND56 463 aaKnown RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 PWWP2AQ96N64 755 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 BIRC8Q96P09 236 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 NAPGQ99747 312 aaPredicted RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 ACAT2Q9BWD1 397 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 PITPNM3Q9BZ71 974 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 SPRTNQ9H040 489 aaPredicted RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 CCDC68Q9H2F9 335 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 ALG2Q9H553 416 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 ZNF71Q9NQZ8 489 aaPredicted RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 IARS2Q9NSE4 1012 aaKnown RBP9.43□□□□□ -0.9
CCDC58-201ENST00000291458 NEU2Q9Y3R4 380 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 MGAQ8IWI9 3026 aa9.43□□□□□ -0.9
CCDC58-201ENST00000291458 COL6A6A6NMZ7 2263 aa9.42□□□□□ -0.9
CCDC58-201ENST00000291458 FAM237BA0A1B0GVD1 139 aa9.42□□□□□ -0.9
CCDC58-201ENST00000291458 DNALI1O14645 258 aaPredicted RBP9.42□□□□□ -0.9
CCDC58-201ENST00000291458 ZNF749O43361 778 aa9.42□□□□□ -0.9
CCDC58-201ENST00000291458 CREG1O75629 220 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms