RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TSPAN19P0C672 248 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 MAPK12P53778 367 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 DEFB103AP81534 67 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 SLBPQ14493 270 aaKnown RBP eCLIP4.68□□□□□ -1.66
UBR1-201ENST00000290650 ZNF57Q68EA5 555 aaPredicted RBP4.68□□□□□ -1.66
UBR1-201ENST00000290650 C17orf99Q6UX52 265 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 RFLNAQ6ZTI6 216 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 C17orf64Q86WR6 236 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 PHYKPLQ8IUZ5 450 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 COLGALT2Q8IYK4 626 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 ADCY4Q8NFM4 1077 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 PIH1D2Q8WWB5 315 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 MAL2Q969L2 176 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 REPS1Q96D71 796 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 RBCK1Q9BYM8 510 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 NUAK2Q9H093 628 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 TMEM165Q9HC07 324 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 INTS10Q9NVR2 710 aaKnown RBP4.68□□□□□ -1.66
UBR1-201ENST00000290650 C1orf109Q9NX04 203 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 PGAP2Q9UHJ9 254 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 KCNK6Q9Y257 313 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 QSER1Q2KHR3 1735 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 ZNF840PA6NDX5 716 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 MAGEB17A8MXT2 336 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 GABRDO14764 452 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 TRIM24O15164 1050 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 GABBR2O75899 941 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 ETV4P43268 484 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 HTR6P50406 440 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 SLC18A1P54219 525 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 RPS13P62277 151 aaKnown RBP4.68□□□□□ -1.66
UBR1-201ENST00000290650 ERVK-8P63133 956 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 MRPL28Q13084 256 aaKnown RBP4.68□□□□□ -1.66
UBR1-201ENST00000290650 CARD16Q5EG05 197 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.68□□□□□ -1.66
UBR1-201ENST00000290650 ATG14Q6ZNE5 492 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 TIFABQ6ZNK6 161 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 DSG4Q86SJ6 1040 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 MEX3DQ86XN8 651 aaKnown RBP4.68□□□□□ -1.66
UBR1-201ENST00000290650 HS3ST5Q8IZT8 346 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 ARL10Q8N8L6 244 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 ATP6V1C2Q8NEY4 427 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 IPCEF1Q8WWN9 437 aaPredicted RBP4.68□□□□□ -1.66
UBR1-201ENST00000290650 TMEM203Q969S6 136 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 AHCYL2Q96HN2 611 aaKnown RBP4.68□□□□□ -1.66
UBR1-201ENST00000290650 TSPAN18Q96SJ8 248 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 CHCHD6Q9BRQ6 235 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 TFB2MQ9H5Q4 396 aaKnown RBP4.68□□□□□ -1.66
UBR1-201ENST00000290650 B4GALT6Q9UBX8 382 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 SEC14L3Q9UDX4 400 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 RPS6KA6Q9UK32 745 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 MAGED1Q9Y5V3 778 aaPredicted RBP4.68□□□□□ -1.66
UBR1-201ENST00000290650 COL24A1Q17RW2 1714 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ANK1P16157 1881 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 TNFRSF11BO00300 401 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 MUSKO15146 869 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 CH25HO95992 272 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PDYNP01213 254 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 CLTBP09497 229 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ALAS2P22557 587 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 GSTM5P46439 218 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 AVPR1BP47901 424 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 HCAR3P49019 387 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 AAK1Q2M2I8 961 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ATP13A5Q4VNC0 1218 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 GPRC6AQ5T6X5 926 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 SULT1C3Q6IMI6 304 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 HID1Q8IV36 788 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 FAM20CQ8IXL6 584 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ADGRG2Q8IZP9 1017 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 POC5Q8NA72 575 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 MDGA1Q8NFP4 955 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ZNF461Q8TAF7 563 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 POF1BQ8WVV4 589 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 DGCR14Q96DF8 476 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 ZHX1-C8orf76Q96EF9 292 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 CENPNQ96H22 339 aaPredicted RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 KXD1Q9BQD3 176 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 TDRD1Q9BXT4 1180 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 SEMA3GQ9NS98 782 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 NDUFA13Q9P0J0 144 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 SLAMF8Q9P0V8 285 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 GULP1Q9UBP9 304 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 MAGEL2Q9UJ55 1249 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 FBXL21Q9UKT6 434 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 HEMK1Q9Y5R4 338 aaPredicted RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 ILVBLA1L0T0 632 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 C1QTNF3-AMACRE9PGA6 284 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 TEX28O15482 410 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 GRID2O43424 1007 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 HLA-DQA2P01906 255 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 FABP3P05413 133 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 FCER2P06734 321 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 CYBAP13498 195 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PTPN2P17706 415 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 MYL12AP19105 171 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 VARSP26640 1264 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 NTSP30990 170 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 NRIP1P48552 1158 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 BNIP3Q12983 259 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms