RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 MBLAC2Q68D91 279 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC2A7Q6PXP3 512 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 FRRS1Q6ZNA5 592 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 OR10Q1Q8NGQ4 319 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 KCNC2Q96PR1 638 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 EIF3KQ9UBQ5 218 aaKnown RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 HOXD13P35453 343 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 RORCP51449 518 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 WSCD2Q2TBF2 565 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 IQCCQ4KMZ1 466 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 WDR45BQ5MNZ6 344 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 FAM46CQ5VWP2 391 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 FAM91A1Q658Y4 838 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 CHST15Q7LFX5 561 aaPredicted RBP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 PIM3Q86V86 326 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 UPF1Q92900 1129 aaKnown RBP eCLIP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 TMEM74Q96NL1 305 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 IL4I1Q96RQ9 567 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 WRAP53Q9BUR4 548 aaKnown RBP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 OR51V1Q9H2C8 321 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 RUVBL1Q9Y265 456 aaKnown RBP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 PER2O15055 1255 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 MSCO60682 206 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 ECI2O75521 394 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 PRKAR2AP13861 404 aaKnown RBP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 SPAG16Q8N0X2 631 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 OR10G2Q8NGC3 310 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 PIGXQ8TBF5 258 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 RFKQ969G6 155 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 POLR2J3Q9H1A7 115 aaKnown RBP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 MMP27Q9H306 513 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 ACOX3O15254 700 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 PDPK1O15530 556 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 NUDT6P53370 316 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 ZNF45Q02386 682 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 NOL9Q5SY16 702 aaKnown RBP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 UBAP2Q5T6F2 1119 aaKnown RBP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 IDNKQ5T6J7 187 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 FAM124AQ86V42 546 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 STX12Q86Y82 276 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 OR10H4Q8NGA5 316 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 AKAP1Q92667 903 aaKnown RBP eCLIP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 BHLHE41Q9C0J9 482 aaPredicted RBP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 ZBTB26Q9HCK0 441 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 EBF1Q9UH73 591 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 FBXW2Q9UKT8 454 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 SPIN1Q9Y657 262 aaPredicted RBP16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 DSC3Q14574 896 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 PCLAFQ15004 111 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 TBRG1Q3YBR2 411 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 RABL3Q5HYI8 236 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 CLEC20AQ6ZU45 233 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC7A5P1Q8MH63 180 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 MAF1Q9H063 256 aa16.13■□□□□ 0.17
SH3RF1-201ENST00000284637 GMFGO60234 142 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 DNAJB5O75953 348 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 CRYZL1O95825 349 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 OPN1SWP03999 348 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 IL7RP16871 459 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC10A7Q0GE19 358 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 LRRC73Q5JTD7 316 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 IFNLR1Q8IU57 520 aaPredicted RBP16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 TOR1AIP2Q8NFQ8 470 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 ASB12Q8WXK4 309 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 FRMD6Q96NE9 622 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 ADAM7Q9H2U9 754 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 TAS2R7Q9NYW3 318 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 PSAT1Q9Y617 370 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 SAP18O00422 153 aaKnown RBP16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 RFPL2O75678 378 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 UFD1Q92890 307 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 CCDC106Q9BWC9 280 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 CHIAQ9BZP6 476 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 PCDHGA11Q9Y5H2 935 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 OR1F1O43749 312 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC24A5Q71RS6 500 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 JAZF1Q86VZ6 243 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 LRRC15Q8TF66 581 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 KCNN2Q9H2S1 579 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 TLE6Q9H808 572 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 GIMAP2Q9UG22 337 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 PDE4DIPQ5VU43 2346 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 A0A075B6Q4 140 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 CACNB4O00305 520 aaPredicted RBP16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 AXIN1O15169 862 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 TRIM3O75382 744 aaPredicted RBP16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 TBX18O95935 607 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 NT5EP21589 574 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 DCDC1P59894 354 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 UFM1P61960 85 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 RBBP4Q09028 425 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 RIPPLY1Q0D2K3 151 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 GRB14Q14449 540 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 TSEN15Q8WW01 171 aaKnown RBP16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 GAB3Q8WWW8 586 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 TMEM203Q969S6 136 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 GTPBP2Q9BX10 602 aaKnown RBP16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 ZNF510Q9Y2H8 683 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 KAT6AQ92794 2004 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms