RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 C19orf47Q8N9M1 422 aaKnown RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 PPFIBP2Q8ND30 876 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 OR9A1PQ8NGU1 263 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 OR2L8Q8NGY9 312 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 MCOLN3Q8TDD5 553 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 SEC14L1Q92503 715 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 EXT2Q93063 718 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 PMEPA1Q969W9 287 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 SLC22A18Q96BI1 424 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 MED8Q96G25 268 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 HIST1H2AHQ96KK5 128 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 TEFMQ96QE5 360 aaKnown RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 CYTH2Q99418 400 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 PKP4Q99569 1192 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 RBBP8Q99708 897 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 MIPEPQ99797 713 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 HIST1H2AJQ99878 128 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 EGFL8Q99944 293 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 H2AFJQ9BTM1 129 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 TRIM54Q9BYV2 358 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ASPSCR1Q9BZE9 553 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ULBP3Q9BZM4 244 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 L2HGDHQ9H9P8 463 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 SYTL2Q9HCH5 934 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 APMAPQ9HDC9 416 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 PRM3Q9NNZ6 103 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ASCL3Q9NQ33 180 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 C1GALT1Q9NS00 363 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 SPHK1Q9NYA1 384 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 UTP6Q9NYH9 597 aaKnown RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 SPATA7Q9P0W8 599 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 KLHL42Q9P2K6 505 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.32□□□□□ -1.4
CD44-204ENST00000279452 ADAMTS6Q9UKP5 1117 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 RARRES3Q9UL19 164 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 KLHL20Q9Y2M5 609 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 MED16Q9Y2X0 877 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 MTO1Q9Y2Z2 717 aaKnown RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 B3GALT1Q9Y5Z6 326 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 V9GYY5 206 aaPredicted RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 DMXL1Q9Y485 3027 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 DNAH14Q0VDD8 3507 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 A0A087WUV0 522 aaPredicted RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 EXOC1LA0A1B0GW35 172 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 CDRT15L2A8MXV6 281 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 TMEM150CB9EJG8 249 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 POC1B-GALNT4F8VUJ3 575 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 STMND1H3BQB6 276 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 EIF3FO00303 357 aaPredicted RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 DXOO77932 396 aaKnown RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 KIAA0754O94854 1291 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 MATN4O95460 622 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 SLC16A8O95907 504 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 TPBGLP0DKB5 382 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 FOLR1P15328 257 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 ZNF37AP17032 561 aaPredicted RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 MAGP20916 626 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 OAS2P29728 719 aaKnown RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 ECHS1P30084 290 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 CMPK1P30085 196 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 PEBP1P30086 187 aaKnown RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 PMS2P54278 862 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 PNLIPRP1P54315 467 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 TAS2R39P59534 338 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 MC2RQ01718 297 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 POU4F1Q01851 419 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 ILF2Q12905 390 aaKnown RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 SP140Q13342 867 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 COL9A2Q14055 689 aaPredicted RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 FASTKQ14296 549 aaKnown RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 GRB7Q14451 532 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 GBX1Q14549 363 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 KIR2DS3Q14952 304 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 TAF1BQ53T94 588 aaPredicted RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 UBAP2Q5T6F2 1119 aaKnown RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 GRTP1Q5TC63 336 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 MROH9Q5TGP6 573 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 C19orf48Q6RUI8 117 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 SUSD1Q6UWL2 747 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 MBOAT1Q6ZNC8 495 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 CLEC14AQ86T13 490 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 TBC1D1Q86TI0 1168 aaPredicted RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 PPP1R3BQ86XI6 285 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 KMT5CQ86Y97 462 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 CEP97Q8IW35 865 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 GPR135Q8IZ08 494 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 SPATA6LQ8N4H0 392 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 NKAPQ8N5F7 415 aaKnown RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 IL22RA1Q8N6P7 574 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 LINC01555Q8NAE3 123 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 KDF1Q8NAX2 398 aaPredicted RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 SNIP1Q8TAD8 396 aaKnown RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 HNRNPLLQ8WVV9 542 aaKnown RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 UBLCP1Q8WVY7 318 aaPredicted RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 ASB11Q8WXH4 323 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 KLHL6Q8WZ60 621 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 SMPDL3AQ92484 453 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 CLIP3Q96DZ5 547 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 SLC41A2Q96JW4 573 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 TRAPPC9Q96Q05 1148 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms