RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 APOBEC4Q8WW27 367 aaKnown RBP13.92□□□□□ -0.18
HMGN3-201ENST00000275036 SLCO2A1Q92959 643 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 ABHD17AQ96GS6 310 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 SYTL2Q9HCH5 934 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 PCYOX1Q9UHG3 505 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 TSR3Q9UJK0 312 aaKnown RBP13.92□□□□□ -0.18
HMGN3-201ENST00000275036 KCND3Q9UK17 655 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 PCDHB3Q9Y5E6 796 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 HEMK1Q9Y5R4 338 aaPredicted RBP13.92□□□□□ -0.18
HMGN3-201ENST00000275036 RELNP78509 3460 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 TNRC6AQ8NDV7 1962 aaKnown RBP13.91□□□□□ -0.18
HMGN3-201ENST00000275036 ISM1B1AKI9 464 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 C21orf140B9A014 251 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 RASGRF2O14827 1237 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 USP1O94782 785 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 C1orf105O95561 183 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 ESR1P03372 595 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 CAPN1P07384 714 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 PKMP14618 531 aaKnown RBP13.91□□□□□ -0.18
HMGN3-201ENST00000275036 CD9P21926 228 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 KIR2DS3Q14952 304 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 MSS51Q4VC12 460 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 COLEC12Q5KU26 742 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 ZNF549Q6P9A3 640 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 CNSTQ6PJW8 725 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 TAX1BP1Q86VP1 789 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 DSELQ8IZU8 1212 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 OR2L8Q8NGY9 312 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 DENND1AQ8TEH3 1009 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 SLC30A3Q99726 388 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 CHST8Q9H2A9 424 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 FANCEQ9HB96 536 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 FBXO6Q9NRD1 293 aaPredicted RBP13.91□□□□□ -0.18
HMGN3-201ENST00000275036 PCMTD2Q9NV79 361 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 ASIC3Q9UHC3 531 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 KLHL20Q9Y2M5 609 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 MED16Q9Y2X0 877 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 MAD1L1Q9Y6D9 718 aa13.91□□□□□ -0.18
HMGN3-201ENST00000275036 MEN1O00255 615 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 KPNA5O15131 536 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 PRICKLE3O43900 615 aaPredicted RBP13.9□□□□□ -0.18
HMGN3-201ENST00000275036 KDM1AO60341 852 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 DNAJB5O75953 348 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 MATN4O95460 622 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 RPN2P04844 631 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 MAGP20916 626 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 PTPN4P29074 926 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 SLC1A2P43004 574 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 CLCN7P51798 805 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 ITGA1P56199 1179 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 LONRF1Q17RB8 773 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 ACSBG2Q5FVE4 666 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 HOOK3Q86VS8 718 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 IGDCC3Q8IVU1 814 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 KLHL7Q8IXQ5 586 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 DNAJC22Q8N4W6 341 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 GIMAP7Q8NHV1 300 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 C9orf43Q8TAL5 461 aaPredicted RBP13.9□□□□□ -0.18
HMGN3-201ENST00000275036 SKA2Q8WVK7 121 aaPredicted RBP13.9□□□□□ -0.18
HMGN3-201ENST00000275036 ANP32BQ92688 251 aaKnown RBP13.9□□□□□ -0.18
HMGN3-201ENST00000275036 MR1Q95460 341 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 TCTN2Q96GX1 697 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 LRFN5Q96NI6 719 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 NAPGQ99747 312 aaPredicted RBP13.9□□□□□ -0.18
HMGN3-201ENST00000275036 TRIM55Q9BYV6 548 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 CHRNA10Q9GZZ6 450 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 SPRTNQ9H040 489 aaPredicted RBP13.9□□□□□ -0.18
HMGN3-201ENST00000275036 ACTR5Q9H9F9 607 aaPredicted RBP13.9□□□□□ -0.18
HMGN3-201ENST00000275036 C20orf96Q9NUD7 363 aaPredicted RBP13.9□□□□□ -0.18
HMGN3-201ENST00000275036 INTS10Q9NVR2 710 aaKnown RBP13.9□□□□□ -0.18
HMGN3-201ENST00000275036 TP53TG5Q9Y2B4 290 aa13.9□□□□□ -0.18
HMGN3-201ENST00000275036 NBASA2RRP1 2371 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 FLNBO75369 2602 aaKnown RBP13.89□□□□□ -0.19
HMGN3-201ENST00000275036 CTAGE9A4FU28 777 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 E7EQ34 232 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 H3BMM5 538 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 PFDN6O15212 129 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 ZNF749O43361 778 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 WISP1O95388 367 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 PDGFAP04085 211 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 CHRM3P20309 590 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 CYP2A7P20853 494 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 MPP1Q00013 466 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 DHX9Q08211 1270 aaKnown RBP13.89□□□□□ -0.19
HMGN3-201ENST00000275036 THOC5Q13769 683 aaKnown RBP13.89□□□□□ -0.19
HMGN3-201ENST00000275036 PTCHD3Q3KNS1 767 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.89□□□□□ -0.19
HMGN3-201ENST00000275036 IZUMO3Q5VZ72 239 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 ZNF385CQ66K41 422 aaPredicted RBP13.89□□□□□ -0.19
HMGN3-201ENST00000275036 CPZQ66K79 652 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 FAM198BQ6UWH4 519 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 ATG14Q6ZNE5 492 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 ZBTB2Q8N680 514 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 GSDMBQ8TAX9 411 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 RAD51AP1Q96B01 352 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 CLIP3Q96DZ5 547 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 PWWP2AQ96N64 755 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 EPN3Q9H201 632 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 PLAC1Q9HBJ0 212 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 SERTAD3Q9UJW9 196 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms