RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CCL14Q16627 93 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 C10orf120Q5SQS8 335 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 SYT6Q5T7P8 510 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 HORMAD1Q86X24 394 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 HIPK1Q86Z02 1210 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 SVOPQ8N4V2 548 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 PARP16Q8N5Y8 322 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ATP6V0D2Q8N8Y2 350 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 MINDY2Q8NBR6 621 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 NPLOC4Q8TAT6 608 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 DNASE1L2Q92874 299 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 REXO5Q96IC2 774 aaKnown RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ACBD6Q9BR61 282 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 TINF2Q9BSI4 451 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 KRT84Q9NSB2 600 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 NAALAD2Q9Y3Q0 740 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 UGT2A1Q9Y4X1 527 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 HTTP42858 3142 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 SLC12A8A0AV02 714 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 TAF4O00268 1085 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 TFECO14948 347 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 SLC16A6O15403 523 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 IDH3BO43837 385 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 NPPAP01160 153 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 COL6A1P12109 1028 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 OGNP20774 298 aaKnown RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 CA8P35219 290 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 TGFBR2P37173 567 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 IDH2P48735 452 aaKnown RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 CRYBB1P53674 252 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 VLDLRP98155 873 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ZXDBP98169 803 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 KIAA0040Q15053 153 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 FAM171BQ6P995 826 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 GDPD3Q7L5L3 318 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 GALNT7Q86SF2 657 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 P3H2Q8IVL5 708 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 RGL4Q8IZJ4 473 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 RNF175Q8N4F7 328 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 SETD9Q8NE22 299 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 C1orf109Q9NX04 203 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 SIRT5Q9NXA8 310 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 GPRC5BQ9NZH0 403 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ILVBLA1L0T0 632 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 CXCL11O14625 94 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 SCELO95171 688 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 GLUD1P00367 558 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 TACR1P25103 407 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 HNRNPFP52597 415 aaKnown RBP12.61□□□□□ -0.39
COL8A1-202ENST00000273342 HUNKP57058 714 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 RPP38P78345 283 aaKnown RBP12.61□□□□□ -0.39
COL8A1-202ENST00000273342 SERINC3Q13530 473 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 TYSND1Q2T9J0 566 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 CHPFQ8IZ52 775 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 GPR150Q8NGU9 434 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 EFHD2Q96C19 240 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-202ENST00000273342 ULK4Q96C45 1275 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 COPS4Q9BT78 406 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 NACA2Q9H009 215 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 THG1LQ9NWX6 298 aaKnown RBP12.61□□□□□ -0.39
COL8A1-202ENST00000273342 OSGIN1Q9UJX0 560 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 DLGAP4Q9Y2H0 992 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 MBLAC1A4D2B0 266 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-202ENST00000273342 AGAP5A6NIR3 686 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 ULK1O75385 1050 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 F2P00734 622 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 AZGP1P25311 298 aaKnown RBP12.61□□□□□ -0.39
COL8A1-202ENST00000273342 MZF1P28698 734 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-202ENST00000273342 S100A5P33763 92 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 PBX3P40426 434 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 PSEN2P49810 448 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 DAB2P98082 770 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 SEMG2Q02383 582 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 ACVR1Q04771 509 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 MAD2L1BPQ15013 274 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-202ENST00000273342 RUNDC3AQ59EK9 446 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 LINGO4Q6UY18 593 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 ZNF551Q7Z340 670 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-202ENST00000273342 CYP2U1Q7Z449 544 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 TLK2Q86UE8 772 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 MMAAQ8IVH4 418 aaKnown RBP12.61□□□□□ -0.39
COL8A1-202ENST00000273342 OR8H2Q8N162 312 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 ATAD1Q8NBU5 361 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 OR52J3Q8NH60 311 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 EMILIN2Q9BXX0 1053 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 BEX2Q9BXY8 128 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 TNKS2Q9H2K2 1166 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 RUBCNLQ9H714 662 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 ELOVL2Q9NXB9 296 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 TBC1D14Q9P2M4 693 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 TESMINQ9Y4I5 508 aa12.61□□□□□ -0.39
COL8A1-202ENST00000273342 DYTNA2CJ06 578 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 C2orf81A6NN90 581 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 STX7O15400 261 aaKnown RBP12.6□□□□□ -0.39
COL8A1-202ENST00000273342 FFAR2O15552 330 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 DYRK3O43781 588 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 CTPS1P17812 591 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 TNFRSF1BP20333 461 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 CDC42EP1Q00587 391 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms