RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 KIAA2013Q8IYS2 634 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 ZNF513Q8N8E2 541 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-201ENST00000269318 NUDT8Q8WV74 236 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 SELENOMQ8WWX9 145 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 HIC2Q96JB3 615 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 MAGEB10Q96LZ2 347 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-201ENST00000269318 ELOVL6Q9H5J4 265 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 SLAMF8Q9P0V8 285 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 CKAP5Q14008 2032 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 C17orf113A0A1B0GUU1 675 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 K7EQS6 105 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 IFRD1O00458 451 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-201ENST00000269318 DNAJA2O60884 412 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 SEC22BO75396 215 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 C1orf105O95561 183 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 SLC16A8O95907 504 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 NPPAP01160 153 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 JUPP14923 745 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 CD22P20273 847 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 VARSP26640 1264 aaKnown RBP16.17■□□□□ 0.18
CCDC40-201ENST00000269318 PEX2P28328 305 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 NEK2P51955 445 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 RHDQ02161 417 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 PCDH1Q08174 1060 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 CHIT1Q13231 466 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 GTF2H3Q13889 308 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 LPCAT4Q643R3 524 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 SLC2A7Q6PXP3 512 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 SUSD1Q6UWL2 747 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 IZUMO2Q6UXV1 221 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 C11orf96Q7Z7L8 435 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 OR56A3Q8NH54 315 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 RIPOR3Q96MK2 946 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 FOPNLQ96NB1 174 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 OR4K3Q96R72 315 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 ECSITQ9BQ95 431 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 RIMS3Q9UJD0 308 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 PCYT1BQ9Y5K3 369 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-201ENST00000269318 TCRBV3S1A0A5B6 114 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 IGLON5A6NGN9 336 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 HALP42357 657 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 TNFRSF4P43489 277 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 NAE1Q13564 534 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 MAP7D1Q3KQU3 841 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 USP39Q53GS9 565 aaKnown RBP16.16■□□□□ 0.18
CCDC40-201ENST00000269318 LIPJQ5W064 366 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 FRG2Q64ET8 278 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 PNCKQ6P2M8 343 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 CACUL1Q86Y37 369 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 LIX1Q8N485 282 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 OR2L2Q8NH16 312 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 DUS3LQ96G46 650 aaKnown RBP16.16■□□□□ 0.18
CCDC40-201ENST00000269318 FRG2BQ96QU4 278 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 SERGEFQ9UGK8 458 aa16.16■□□□□ 0.18
CCDC40-201ENST00000269318 E7EQ34 232 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 POP7O75817 140 aaKnown RBP16.15■□□□□ 0.18
CCDC40-201ENST00000269318 ADH1BP00325 375 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 C5AR1P21730 350 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 CCR3P51677 355 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 GTF2A1P52655 376 aaPredicted RBP16.15■□□□□ 0.18
CCDC40-201ENST00000269318 TRIP10Q15642 601 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 WSCD2Q2TBF2 565 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 RABL3Q5HYI8 236 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 OGFRL1Q5TC84 451 aaPredicted RBP16.15■□□□□ 0.18
CCDC40-201ENST00000269318 CACHD1Q5VU97 1274 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 DLEU7Q6UYE1 221 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.15■□□□□ 0.18
CCDC40-201ENST00000269318 DHFR2Q86XF0 187 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 LILRA2Q8N149 483 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 DNAJB14Q8TBM8 379 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 TRIM8Q9BZR9 551 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 CIDEBQ9UHD4 219 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 LRCH1Q9Y2L9 728 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 PEX1O43933 1283 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 BCKDHAP12694 445 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 DGKQP52824 942 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 IRF8Q02556 426 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 PLOD1Q02809 727 aaPredicted RBP16.15■□□□□ 0.18
CCDC40-201ENST00000269318 AGERQ15109 404 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 CRTC3Q6UUV7 619 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 PRR23BQ6ZRT6 265 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 HEATR4Q86WZ0 1026 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 TMEM126BQ8IUX1 230 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 GLB1L3Q8NCI6 653 aaPredicted RBP16.15■□□□□ 0.18
CCDC40-201ENST00000269318 HM13Q8TCT9 377 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 KLHL4Q9C0H6 718 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 DPEP2Q9H4A9 486 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 TMEM98Q9Y2Y6 226 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 NEUROG3Q9Y4Z2 214 aa16.15■□□□□ 0.18
CCDC40-201ENST00000269318 UNC80Q8N2C7 3258 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 MYO9BQ13459 2157 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 MGAT4DA6NG13 374 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 RNASEH1O60930 286 aaKnown RBP16.14■□□□□ 0.17
CCDC40-201ENST00000269318 ATP6V1B2P21281 511 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 ACADLP28330 430 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 CASP2P42575 452 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 MTHFRP42898 656 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 CDK3Q00526 305 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 ZNF33BQ06732 778 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 BNIP2Q12982 314 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms