RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 FASTKQ14296 549 aaKnown RBP15.89■□□□□ 0.13
TPM1-201ENST00000267996 NFATC4Q14934 902 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 C6orf136Q5SQH8 315 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 LIPJQ5W064 366 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 GALNT13Q8IUC8 556 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 DCUN1D3Q8IWE4 304 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 RAD51AP1Q96B01 352 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 NELL2Q99435 816 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 FGF22Q9HCT0 170 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 AIG1Q9NVV5 245 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 GPRC5BQ9NZH0 403 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 KLQ9UEF7 1012 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 SUFUQ9UMX1 484 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 ASF1AQ9Y294 204 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 HS3ST3A1Q9Y663 406 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 KANSL1LA0AUZ9 987 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 SERTM1A2A2V5 107 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 MEI4A8MW99 385 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 SLC28A1O00337 649 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 FFAR3O14843 346 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 LSM1O15116 133 aaKnown RBP15.89■□□□□ 0.13
TPM1-201ENST00000267996 GPR42O15529 346 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 ULK1O75385 1050 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 APBB3O95704 486 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 KRT6AP02538 564 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 KRT6BP04259 564 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 ACP5P13686 325 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 IDO1P14902 403 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 OXTRP30559 389 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 KRT6CP48668 564 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 STX1BP61266 288 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 MAPRE2Q15555 327 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 SMU1Q2TAY7 513 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 AGKQ53H12 422 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 GCNT7Q6ZNI0 430 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 CHST15Q7LFX5 561 aaPredicted RBP15.89■□□□□ 0.13
TPM1-201ENST00000267996 FUNDC1Q8IVP5 155 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 PGBD3Q8N328 593 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 TMEM145Q8NBT3 493 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 BRINP2Q9C0B6 783 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 EBF2Q9HAK2 575 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 CIDEBQ9UHD4 219 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 E7ENX8 843 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 IFRD1O00458 451 aaPredicted RBP15.88■□□□□ 0.13
TPM1-201ENST00000267996 TOR1BO14657 336 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 MGRN1O60291 552 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 RPN2P04844 631 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 IGHV4-34P06331 123 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 ERGP11308 486 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 JUPP14923 745 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 EZRP15311 586 aaKnown RBP15.88■□□□□ 0.13
TPM1-201ENST00000267996 ITGAXP20702 1163 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 KELP23276 732 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 AKT2P31751 481 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 CASP2P42575 452 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 YPEL5P62699 121 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 TAP2Q03519 686 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 EMX2Q04743 252 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 CHIT1Q13231 466 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 UBXN2BQ14CS0 331 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 CPSF6Q16630 551 aaKnown RBP eCLIP15.88■□□□□ 0.13
TPM1-201ENST00000267996 ATP6AP1LQ52LC2 224 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 KIAA0895LQ68EN5 471 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 ANO7Q6IWH7 933 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 CYB5D1Q6P9G0 228 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 GK5Q6ZS86 529 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 MIER2Q8N344 545 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 TSTD1Q8NFU3 115 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 OR5AR1Q8NGP9 310 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 OR5K2Q8NHB8 316 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 PPP3R2Q96LZ3 170 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 MRPL40Q9NQ50 206 aaKnown RBP15.88■□□□□ 0.13
TPM1-201ENST00000267996 PRDM6Q9NQX0 595 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 FARSBQ9NSD9 589 aaKnown RBP15.88■□□□□ 0.13
TPM1-201ENST00000267996 TMEM45AQ9NWC5 275 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 WSB2Q9NYS7 404 aaPredicted RBP15.88■□□□□ 0.13
TPM1-201ENST00000267996 ZNF490Q9ULM2 529 aaPredicted RBP15.88■□□□□ 0.13
TPM1-201ENST00000267996 SNX6Q9UNH7 406 aa15.88■□□□□ 0.13
TPM1-201ENST00000267996 PRSS38A1L453 326 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 C19orf67A6NJJ6 358 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 FAM170BA6NMN3 283 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 NPIPB8E9PQR5 432 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 TNFRSF10CO14798 259 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 RGS14O43566 566 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 SLC35G4P0C7Q5 338 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 PGM1P36871 562 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 CLCNKAP51800 687 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 RAP1GDS1P52306 607 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 PNLIPRP1P54315 467 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 DIO3P55073 304 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 TBPL1P62380 186 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 MXRA7P84157 204 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 SLC25A3Q00325 362 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 IRF8Q02556 426 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 ZNF33BQ06732 778 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 CUL3Q13618 768 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 ARHGAP19Q14CB8 494 aa15.87■□□□□ 0.13
TPM1-201ENST00000267996 ZRSR2Q15696 482 aaKnown RBP15.87■□□□□ 0.13
TPM1-201ENST00000267996 CAPN13Q6MZZ7 669 aaPredicted RBP15.87■□□□□ 0.13
TPM1-201ENST00000267996 PPFIBP2Q8ND30 876 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms