RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 SELPP16109 830 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 CLCN4P51793 760 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 ECM1Q16610 540 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 KLHL22Q53GT1 634 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 PRR23BQ6ZRT6 265 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 PDPRQ8NCN5 879 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 ARNTL2Q8WYA1 636 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 KCNC2Q96PR1 638 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 PAK6Q9NQU5 681 aaPredicted RBP14.02□□□□□ -0.17
CUX2-201ENST00000261726 LYARQ9NX58 379 aaKnown RBP14.02□□□□□ -0.17
CUX2-201ENST00000261726 NOL4O94818 638 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 CCNCP24863 283 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 EFR3AQ14156 821 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 INTS6LQ5JSJ4 861 aaKnown RBP14.02□□□□□ -0.17
CUX2-201ENST00000261726 ALG3Q92685 438 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 LENG8Q96PV6 779 aaPredicted RBP14.02□□□□□ -0.17
CUX2-201ENST00000261726 TREM1Q9NP99 234 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 SMIM35A0A1B0GVV1 85 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 EFCAB9A8MZ26 197 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 TMEM150CB9EJG8 249 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 KLRC4O43908 158 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 KAT7O95251 611 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 CD48P09326 243 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 CCNOP22674 350 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 ODF4Q2M2E3 257 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 ALG10Q5BKT4 473 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 SSX6Q7RTT6 188 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 IRF2BP2Q7Z5L9 587 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 NXPE1Q8N323 547 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 CYP2S1Q96SQ9 504 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 SPIN1Q9Y657 262 aaPredicted RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 CLCA3PQ9Y6N3 262 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 PRKCGP05129 697 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 ZNF3P17036 446 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 PEX2P28328 305 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 SCARB2Q14108 478 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 PRKD1Q15139 912 aaPredicted RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 USF2Q15853 346 aaPredicted RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 CDKL4Q5MAI5 379 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 SLC25A25Q6KCM7 469 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 TMEM17Q86X19 198 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 ASB12Q8WXK4 309 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 ADAD1Q96M93 576 aaKnown RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 POLR2J2Q9GZM3 115 aaKnown RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 STOX2Q9P2F5 926 aaPredicted RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 A0A1W2PRQ8 180 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 CPED1A4D0V7 1026 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 TCAF2A6NFQ2 919 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 DGKGP49619 791 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 IDH3AP50213 366 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 RALGPS1Q5JS13 557 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 PRPF38BQ5VTL8 546 aaKnown RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 PLD5Q8N7P1 536 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 ZBED6CLQ96FA7 236 aaPredicted RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 CCDC86Q9H6F5 360 aaKnown RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 CPQQ9Y646 472 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 C8GP07360 202 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 SLURP2P0DP57 97 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 ATP5A1P25705 553 aaKnown RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 CD47Q08722 323 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 KLHL36Q8N4N3 616 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 DQX1Q8TE96 717 aaKnown RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 PSMG2Q969U7 264 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 CDK15Q96Q40 435 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 EHD1Q9H4M9 534 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 ANKRA2Q9H9E1 313 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 HEBP2Q9Y5Z4 205 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 TRIM64BA6NI03 449 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 A8MU76 341 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 TREHO43280 583 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 C9IYK1 514 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 SLIT3O75094 1523 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 GPIP06744 558 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 RPL17P18621 184 aaKnown RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 GJA9P57773 515 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 GALNT15Q8N3T1 639 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 CNTD1Q8N815 330 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 CNDP2Q96KP4 475 aaKnown RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 IRF2BPLQ9H1B7 796 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 UNC93B1Q9H1C4 597 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 CXorf21Q9HAI6 301 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 POLMQ9NP87 494 aaPredicted RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 RCOR3Q9P2K3 495 aaPredicted RBP14.01□□□□□ -0.17
CUX2-201ENST00000261726 PADI3Q9ULW8 664 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 PCDHGB7Q9Y5F8 929 aa14.01□□□□□ -0.17
CUX2-201ENST00000261726 CSTBP04080 98 aaKnown RBP14□□□□□ -0.17
CUX2-201ENST00000261726 MCCD1P59942 119 aaPredicted RBP14□□□□□ -0.17
CUX2-201ENST00000261726 BLMHQ13867 455 aa14□□□□□ -0.17
CUX2-201ENST00000261726 SPATC1Q76KD6 591 aa14□□□□□ -0.17
CUX2-201ENST00000261726 OR5AK3PQ8NH89 298 aa14□□□□□ -0.17
CUX2-201ENST00000261726 ACOT12Q8WYK0 555 aa14□□□□□ -0.17
CUX2-201ENST00000261726 KREMEN1Q96MU8 473 aa14□□□□□ -0.17
CUX2-201ENST00000261726 DGAT2Q96PD7 388 aa14□□□□□ -0.17
CUX2-201ENST00000261726 SERINC1Q9NRX5 453 aa14□□□□□ -0.17
CUX2-201ENST00000261726 ABCB8Q9NUT2 735 aa14□□□□□ -0.17
CUX2-201ENST00000261726 TRAPPC6AO75865 159 aa14□□□□□ -0.17
CUX2-201ENST00000261726 XKP51811 444 aa14□□□□□ -0.17
CUX2-201ENST00000261726 LRRC32Q14392 662 aa14□□□□□ -0.17
CUX2-201ENST00000261726 FSTL4Q6MZW2 842 aa14□□□□□ -0.17
CUX2-201ENST00000261726 LCLAT1Q6UWP7 414 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms