RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 SPATA6LQ8N4H0 392 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 TTC9Q92623 222 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 ACDQ96AP0 544 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 TMIGD2Q96BF3 282 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 OR2M2Q96R28 347 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 FUZQ9BT04 418 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 POLR1EQ9GZS1 481 aaKnown RBP8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 FXYD6Q9H0Q3 95 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 ATP13A2Q9NQ11 1180 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 IFT46Q9NQC8 304 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 SEMA3GQ9NS98 782 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 POLHQ9Y253 713 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 TLR6Q9Y2C9 796 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 U3KQV3 271 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 TNRC6CQ9HCJ0 1690 aaKnown RBP8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 GLYATL1P3A0A0U1RQE8 302 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 A0A1B0GVC2 190 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 TCRBV3S1A0A5B6 114 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 E9PAM4 449 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 SOCS2O14508 198 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 ADAM12O43184 909 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 TMEM63AO94886 807 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 MAP3K6O95382 1288 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 PAK4O96013 591 aaPredicted RBP8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 IFNA6P05013 189 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 SMIM18P0DKX4 95 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 CLUP10909 449 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 ITGAMP11215 1152 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 CETPP11597 493 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 MAGEA12P43365 314 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 RGS6P49758 472 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 RPL7AP62424 266 aaKnown RBP8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 ZNF33BQ06732 778 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 CAMK2GQ13555 558 aaPredicted RBP8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 GRM3Q14832 879 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 ZNF484Q5JVG2 852 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 ATG9BQ674R7 924 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 TATDN1Q6P1N9 297 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 C3orf67Q6ZVT6 689 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 RALGPS2Q86X27 583 aaPredicted RBP8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 FAM20CQ8IXL6 584 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 GLIS3Q8NEA6 775 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 LURAP1Q96LR2 239 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 AP5M1Q9H0R1 490 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 NT5MQ9NPB1 228 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 BTG4Q9NY30 223 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 ZNF282Q9UDV7 671 aaPredicted RBP8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 PCDHGB7Q9Y5F8 929 aa8.17□□□□□ -1.1
SNCAIP-201ENST00000261367 NUDT19A8MXV4 375 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 TLR4O00206 839 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 ADAM10O14672 748 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 PIP5K1BO14986 540 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 NKRFO15226 690 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 KERAO60938 352 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 PSMD10O75832 226 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 OR5F1O95221 314 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 RAB36O95755 333 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 MT-ND1P03886 318 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 TGFB2P61812 414 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 ILF3Q12906 894 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 KCNAB2Q13303 367 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 DDX39BQ13838 428 aaKnown RBP8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 HEPACAMQ14CZ8 416 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 NOTUMQ6P988 496 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 CHDHQ8NE62 594 aaPredicted RBP8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 FAM46DQ8NEK8 389 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 OR14K1Q8NGZ2 314 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 ARL11Q969Q4 196 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 P2RY11Q96G91 374 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 FBXO8Q9NRD0 319 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 IL17RBQ9NRM6 502 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 SPIN1Q9Y657 262 aaPredicted RBP8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 LRRTM2O43300 516 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 LRCH4O75427 683 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 ATP6AP2O75787 350 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 EGFRP00533 1210 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 ZDHHC11BP0C7U3 371 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 NCK1P16333 377 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 UBA1P22314 1058 aaKnown RBP8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 NTSP30990 170 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 CCNJQ5T5M9 372 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 FBXL19Q6PCT2 694 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 SERPINA13PQ6UXR4 307 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 ZSWIM9Q86XI8 627 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 ZNF567Q8N184 647 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 C12orf45Q8N5I9 185 aaPredicted RBP8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 GATAD2BQ8WXI9 593 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 CAMK1GQ96NX5 476 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 ZNF350Q9GZX5 532 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 MTFR1LQ9H019 292 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 OR51E2Q9H255 320 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 TMLHEQ9NVH6 421 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 ZNF358Q9NW07 568 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 PPIEQ9UNP9 301 aaKnown RBP8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 DNAJB6O75190 326 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 ZNF432O94892 652 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 FOSL2P15408 326 aa8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 YBX3P16989 372 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNCAIP-201ENST00000261367 CXCR2P25025 360 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms