RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ADH5P11766 374 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 PREPP48147 710 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 RPS14P62263 151 aaKnown RBP21.1■□□□□ 0.97
CLN6-201ENST00000249806 SP140Q13342 867 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 ACOX1Q15067 660 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 ZNF284Q2VY69 593 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 CNPY1Q3B7I2 92 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 GTDC1Q4AE62 458 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 GGTA1PQ4G0N0 100 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 DPPA4Q7L190 304 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 PARS2Q7L3T8 475 aaKnown RBP21.1■□□□□ 0.97
CLN6-201ENST00000249806 C12orf76Q8N812 135 aaPredicted RBP21.1■□□□□ 0.97
CLN6-201ENST00000249806 L3MBTL4Q8NA19 623 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 APIPQ96GX9 242 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 ZFYVE19Q96K21 471 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 CHID1Q9BWS9 393 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 DNAJC11Q9NVH1 559 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.1■□□□□ 0.97
CLN6-201ENST00000249806 KANSL1LA0AUZ9 987 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 KPNA3O00505 521 aaPredicted RBP21.1■□□□□ 0.97
CLN6-201ENST00000249806 SLC9A3R1O14745 358 aaPredicted RBP21.1■□□□□ 0.97
CLN6-201ENST00000249806 AP2A2O94973 939 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 FTH1P02794 183 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 ELFN1P0C7U0 828 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 MMP12P39900 470 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 HALP42357 657 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 AP1S2P56377 157 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.1■□□□□ 0.97
CLN6-201ENST00000249806 METTL25Q8N6Q8 603 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 TFAP2CQ92754 450 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 TSSK3Q96PN8 268 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 MAGEL2Q9UJ55 1249 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 NUP214P35658 2090 aaPredicted RBP21.09■□□□□ 0.97
CLN6-201ENST00000249806 B3GALT4O96024 378 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 CHIT1Q13231 466 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 ATP6AP1Q15904 470 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 CCSMST1Q4G0I0 132 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 TBC1D21Q8IYX1 336 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 CELF5Q8N6W0 485 aaKnown RBP21.09■□□□□ 0.97
CLN6-201ENST00000249806 GLYATL1Q969I3 302 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 NXPE3Q969Y0 559 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 AP2M1Q96CW1 435 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 EGLN2Q96KS0 407 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 COQ6Q9Y2Z9 468 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 ARHGEF33A8MVX0 844 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 ZNF197O14709 1029 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 CLGNO14967 610 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 TULP3O75386 442 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 GNAO1P09471 354 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 FCGR1AP12314 374 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 TCF3P15923 654 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 NFKBIAP25963 317 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 RPL5P46777 297 aaKnown RBP21.09■□□□□ 0.97
CLN6-201ENST00000249806 TMEM115Q12893 351 aaPredicted RBP21.09■□□□□ 0.97
CLN6-201ENST00000249806 NEK10Q6ZWH5 1172 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 OR2T12Q8NG77 320 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 C9orf16Q9BUW7 83 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 DKK3Q9UBP4 350 aa21.09■□□□□ 0.97
CLN6-201ENST00000249806 PRRT4C9JH25 899 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 SRPRAP08240 638 aaKnown RBP21.08■□□□□ 0.97
CLN6-201ENST00000249806 HLA-EP13747 358 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 GGT1P19440 569 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 SLC6A11P48066 632 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 CYP4F3Q08477 520 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 FRG2Q64ET8 278 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 KRT80Q6KB66 452 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 RASGRP3Q8IV61 690 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 PHACTR4Q8IZ21 702 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 PACRGLQ8N7B6 248 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 FIG4Q92562 907 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 GFM2Q969S9 779 aaKnown RBP21.08■□□□□ 0.97
CLN6-201ENST00000249806 TIFAQ96CG3 184 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 FRG2BQ96QU4 278 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 TBCDQ9BTW9 1192 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 MRPS26Q9BYN8 205 aaKnown RBP21.08■□□□□ 0.97
CLN6-201ENST00000249806 ANKRD60Q9BZ19 345 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 GRIP2Q9C0E4 1043 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 OLAHQ9NV23 265 aa21.08■□□□□ 0.97
CLN6-201ENST00000249806 REV3LO60673 3130 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 OTOL1A6NHN0 477 aaPredicted RBP21.08■□□□□ 0.96
CLN6-201ENST00000249806 EI24O14681 340 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 LRATO95237 230 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 GSTM1P09488 218 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 CD22P20273 847 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 CLDN8P56748 225 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 GSTM4Q03013 218 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 UBE3AQ05086 875 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 CYP2U1Q7Z449 544 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 SPRED1Q7Z699 444 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 ANKRD46Q86W74 232 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 MFSD2AQ8NA29 543 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 OSCP1Q8WVF1 389 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 TMEM159Q96B96 161 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 LRIG1Q96JA1 1093 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 APOLD1Q96LR9 279 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 PCDHB14Q9Y5E9 798 aa21.08■□□□□ 0.96
CLN6-201ENST00000249806 TCF20Q9UGU0 1960 aaKnown RBP21.07■□□□□ 0.96
CLN6-201ENST00000249806 SDC1P18827 310 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 MAP4P27816 1152 aaKnown RBP21.07■□□□□ 0.96
CLN6-201ENST00000249806 PDHA2P29803 388 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms