RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ZIM2Q9NZV7 527 aa22.73■■□□□ 1.23
SYNGR3-201ENST00000248121 ZNHIT2Q9UHR6 403 aa22.73■■□□□ 1.23
SYNGR3-201ENST00000248121 KCNE1BA0A087WTH5 132 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 PLRG1O43660 514 aaKnown RBP22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 BCAS2O75934 225 aaPredicted RBP22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 CLDN9O95484 217 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 G6PDP11413 515 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 PBLDP30039 288 aaPredicted RBP22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 HMGCS1Q01581 520 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 CCSMST1Q4G0I0 132 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 SYTL3Q4VX76 610 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 TLDC1Q6P9B6 456 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 TSPEARQ8WU66 669 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 SIPA1Q96FS4 1042 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 LGR4Q9BXB1 951 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 SLC22A14Q9Y267 594 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 A0A1W2PP18 115 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 TCRBV21S2A2A0A5A6 115 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 ANKRD28O15084 1053 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 ANGPT2O15123 496 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 ULK1O75385 1050 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 ATXN3P54252 364 aaPredicted RBP22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 PFN3P60673 137 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 PPP2CBP62714 309 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 PPP2CAP67775 309 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 BCL7AQ4VC05 210 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 COQ5Q5HYK3 327 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 IL23RQ5VWK5 629 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 KIAA1324Q6UXG2 1013 aaKnown RBP22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 KBTBD2Q8IY47 623 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 FBXL8Q96CD0 374 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 ACTR8Q9H981 624 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 IL1RL2Q9HB29 575 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 GMPR2Q9P2T1 348 aaKnown RBP22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 ZNF490Q9ULM2 529 aaPredicted RBP22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 MMP17Q9ULZ9 603 aa22.72■■□□□ 1.23
SYNGR3-201ENST00000248121 NVLO15381 856 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 PAK4O96013 591 aaPredicted RBP22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 ITPKAP23677 461 aa22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 MAT2AP31153 395 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 SLC7A2P52569 658 aa22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 CPSF6Q16630 551 aaKnown RBP eCLIP22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 SGO1Q5FBB7 561 aa22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 ZNF547Q8IVP9 402 aa22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 SLC22A15Q8IZD6 547 aa22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 ZNF687Q8N1G0 1237 aa22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 BHLHE22Q8NFJ8 381 aaPredicted RBP22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 NUDT8Q8WV74 236 aa22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 SLC29A3Q9BZD2 475 aa22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 PCDHAC1Q9H158 963 aa22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 ATXN10Q9UBB4 475 aa22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 SUCOQ9UBS9 1254 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 POLR3HQ9Y535 204 aaPredicted RBP22.71■■□□□ 1.23
SYNGR3-201ENST00000248121 KRBA1A5PL33 1030 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 RPSAP08865 295 aaKnown RBP22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 CHRNB1P11230 501 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 GABRG2P18507 467 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 POLR2JP52435 117 aaKnown RBP22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 PAGE3Q5JUK9 113 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 CYP20A1Q6UW02 462 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 DHDDSQ86SQ9 333 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 RGL4Q8IZJ4 473 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 ASB9Q96DX5 294 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 PPP3R2Q96LZ3 170 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 FZD3Q9NPG1 666 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 TMEM98Q9Y2Y6 226 aa22.7■■□□□ 1.23
SYNGR3-201ENST00000248121 USP34Q70CQ2 3546 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 A0A1W2PQU0 124 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 RSL1D1O76021 490 aaKnown RBP22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 BDKRB1P46663 353 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 KCNK10P57789 538 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 TRIM25Q14258 630 aaKnown RBP22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 IRF4Q15306 451 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 TLR1Q15399 786 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 TAF11Q15544 211 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 GGTA1PQ4G0N0 100 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 FBXO43Q4G163 708 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 PNCKQ6P2M8 343 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 HEATR4Q86WZ0 1026 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 ANKRD27Q96NW4 1050 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 ABCD2Q9UBJ2 740 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 CIDEBQ9UHD4 219 aa22.7■■□□□ 1.22
SYNGR3-201ENST00000248121 FAM234BA2RU67 622 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 SLC28A1O00337 649 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 RGS14O43566 566 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 SLC2A4P14672 509 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 RPL38P63173 70 aaKnown RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 GAS6Q14393 721 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 CAPRIN1Q14444 709 aaKnown RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 MINDY1Q8N5J2 469 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 L3MBTL4Q8NA19 623 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 TP53I13Q8NBR0 393 aaPredicted RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 DNAJC9Q8WXX5 260 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 LRRC58Q96CX6 371 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 MTFMTQ96DP5 389 aaKnown RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 MYOCQ99972 504 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 FBRSQ9HAH7 460 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 TRIM39Q9HCM9 518 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 DNAJC11Q9NVH1 559 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 PRKAB1Q9Y478 270 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms