RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 VPS4AQ9UN37 437 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 LOC100506127A0A0U1RQW1 187 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 DNAJB5O75953 348 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 RSL1D1O76021 490 aaKnown RBP10.77□□□□□ -0.69
COPA-201ENST00000241704 ESR1P03372 595 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 RPL10P27635 214 aaKnown RBP10.77□□□□□ -0.69
COPA-201ENST00000241704 PTGER3P43115 390 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 PRKAG1P54619 331 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 GNA13Q14344 377 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 XKR6Q5GH73 641 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 SCIMPQ6UWF3 145 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 CMTR2Q8IYT2 770 aaKnown RBP10.77□□□□□ -0.69
COPA-201ENST00000241704 Q8N9G6 341 aaPredicted RBP10.77□□□□□ -0.69
COPA-201ENST00000241704 SLC22A17Q8WUG5 538 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 SIGLEC10Q96LC7 697 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 GPR62Q9BZJ7 368 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 R3HDMLQ9H3Y0 253 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 KAT8Q9H7Z6 458 aaKnown RBP10.77□□□□□ -0.69
COPA-201ENST00000241704 GPN2Q9H9Y4 310 aaPredicted RBP10.77□□□□□ -0.69
COPA-201ENST00000241704 CCNB1IP1Q9NPC3 277 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 ACSS2Q9NR19 701 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 ADPRHL2Q9NX46 363 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 CRNNQ9UBG3 495 aaPredicted RBP10.77□□□□□ -0.69
COPA-201ENST00000241704 GPN3Q9UHW5 284 aaPredicted RBP10.77□□□□□ -0.69
COPA-201ENST00000241704 GMEB2Q9UKD1 530 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 PCDHGA10Q9Y5H3 936 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 ECM29Q5VYK3 1845 aa10.77□□□□□ -0.69
COPA-201ENST00000241704 NPEPPSL1A6NEC2 478 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 LOC110117498-PIK3R3F6TDL0 507 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 TK2O00142 265 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 TFECO14948 347 aaPredicted RBP10.76□□□□□ -0.69
COPA-201ENST00000241704 CSKP41240 450 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 PPP5CP53041 499 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.76□□□□□ -0.69
COPA-201ENST00000241704 ZNHIT3Q15649 155 aaPredicted RBP10.76□□□□□ -0.69
COPA-201ENST00000241704 PITRM1Q5JRX3 1037 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 PDE12Q6L8Q7 609 aaKnown RBP10.76□□□□□ -0.69
COPA-201ENST00000241704 C17orf64Q86WR6 236 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 C12orf76Q8N812 135 aaPredicted RBP10.76□□□□□ -0.69
COPA-201ENST00000241704 ZNF540Q8NDQ6 660 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 FUNDC2Q9BWH2 189 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 TMEM248Q9NWD8 314 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 IMPAD1Q9NX62 359 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 N6AMT1Q9Y5N5 214 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 HAS3O00219 553 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 LINC00032P0C843 101 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 RRM2P31350 389 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 ACVRL1P37023 503 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 CPSF6Q16630 551 aaKnown RBP eCLIP10.76□□□□□ -0.69
COPA-201ENST00000241704 KLHL12Q53G59 568 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 ATXN7L2Q5T6C5 722 aaPredicted RBP10.76□□□□□ -0.69
COPA-201ENST00000241704 UBE2R2Q712K3 238 aaPredicted RBP10.76□□□□□ -0.69
COPA-201ENST00000241704 CMTM8Q8IZV2 173 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 TRPV3Q8NET8 790 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 DNAJB14Q8TBM8 379 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 OVCA2Q8WZ82 227 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 PHF21AQ96BD5 680 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 VPS35Q96QK1 796 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 C20orf27Q9GZN8 174 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 NKX2-4Q9H2Z4 354 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 ZNF358Q9NW07 568 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 OR2AG2A6NM03 316 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 BTN3A3O00478 584 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 RASAL1O95294 804 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 SYCE2Q6PIF2 218 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 XIRP1Q702N8 1843 aaKnown RBP10.76□□□□□ -0.69
COPA-201ENST00000241704 LUZP2Q86TE4 346 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 TSGA13Q96PP4 275 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 CD84Q9UIB8 345 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 DDX60LQ5H9U9 1706 aaKnown RBP10.76□□□□□ -0.69
COPA-201ENST00000241704 G3V2T6 193 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 TSPAN4O14817 238 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 OAZ2O95190 189 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 TIMP1P01033 207 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 CYP11A1P05108 521 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 CA3P07451 260 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 ZNF252P-AS1Q0IIN9 211 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 C5orf22Q49AR2 442 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 FAM182AQ5T1J6 154 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 ZNF621Q6ZSS3 439 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 CDK20Q8IZL9 346 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 ZBTB2Q8N680 514 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 MFSD2AQ8NA29 543 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 CNDP2Q96KP4 475 aaKnown RBP10.76□□□□□ -0.69
COPA-201ENST00000241704 SLC38A3Q99624 504 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 PSD2Q9BQI7 771 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 OR10H1Q9Y4A9 318 aa10.76□□□□□ -0.69
COPA-201ENST00000241704 BCORQ6W2J9 1755 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 H0YAE9 185 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 SCAMP1O15126 338 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 BCAS1O75363 584 aaPredicted RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 ANXA6P08133 673 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 COX7A2P14406 83 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 RPL38P63173 70 aaKnown RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 LRRC32Q14392 662 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 MAPKAPK3Q16644 382 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 SPESP1Q6UW49 350 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 GPRIN1Q7Z2K8 1008 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 R3HCC1LQ7Z5L2 792 aaKnown RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 SERPINA9Q86WD7 417 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms