RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TNFSF15O95150 251 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 FKBP9O95302 570 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 C1orf105O95561 183 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 C8GP07360 202 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 HIST1H2AGP0C0S8 130 aaPredicted RBP10.93□□□□□ -0.66
SF3B6-201ENST00000233468 PLA2G2AP14555 144 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 POLR2CP19387 275 aaPredicted RBP10.93□□□□□ -0.66
SF3B6-201ENST00000233468 HIST1H2ADP20671 130 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 CYP2A7P20853 494 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 TSPAN7P41732 249 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 GPX6P59796 221 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 POU4F1Q01851 419 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 CFHR1Q03591 330 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 SP140Q13342 867 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 KIR2DS3Q14952 304 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 KYNUQ16719 465 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 ACSBG2Q5FVE4 666 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 TEX35Q5T0J7 233 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 FAM92BQ6ZTR7 304 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 TAOK1Q7L7X3 1001 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 TMPRSS9Q7Z410 1059 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 BPHLQ86WA6 291 aaPredicted RBP10.93□□□□□ -0.66
SF3B6-201ENST00000233468 ZC3HC1Q86WB0 502 aaKnown RBP10.93□□□□□ -0.66
SF3B6-201ENST00000233468 FAM129CQ86XR2 697 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 NKAPQ8N5F7 415 aaKnown RBP10.93□□□□□ -0.66
SF3B6-201ENST00000233468 FBXO15Q8NCQ5 510 aaPredicted RBP10.93□□□□□ -0.66
SF3B6-201ENST00000233468 RCBTB1Q8NDN9 531 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 CD200R1Q8TD46 325 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 MCOLN3Q8TDD5 553 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 FBF1Q8TES7 1133 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 HIST1H2AHQ96KK5 128 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 SLC46A1Q96NT5 459 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 TEFMQ96QE5 360 aaKnown RBP10.93□□□□□ -0.66
SF3B6-201ENST00000233468 TAAR9Q96RI9 348 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 HIST1H2AJQ99878 128 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 H2AFJQ9BTM1 129 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 REPIN1Q9BWE0 567 aaKnown RBP10.93□□□□□ -0.66
SF3B6-201ENST00000233468 TRIM54Q9BYV2 358 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 ZNF768Q9H5H4 540 aaKnown RBP10.93□□□□□ -0.66
SF3B6-201ENST00000233468 POPDC3Q9HBV1 291 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 C1GALT1Q9NS00 363 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 PISDQ9UG56 409 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 NFU1Q9UMS0 254 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 PCDHGA7Q9Y5G6 932 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 IKBKGQ9Y6K9 419 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 FAM95CA0A1B0GW59 222 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 PMS2P1A4D2B8 440 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 EFCAB7A8K855 629 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 RASGRF2O14827 1237 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 NVLO15381 856 aaKnown RBP10.92□□□□□ -0.66
SF3B6-201ENST00000233468 PSIP1O75475 530 aaKnown RBP10.92□□□□□ -0.66
SF3B6-201ENST00000233468 SLU7O95391 586 aaKnown RBP10.92□□□□□ -0.66
SF3B6-201ENST00000233468 ZBTB11O95625 1053 aaPredicted RBP10.92□□□□□ -0.66
SF3B6-201ENST00000233468 SAT1P21673 171 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 CDH3P22223 829 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 FDXRP22570 491 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 MCM3P25205 808 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 CD82P27701 267 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 GFERP55789 205 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 HSD11B2P80365 405 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 ACY1Q03154 408 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 ARHGAP19Q14CB8 494 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 NAA25Q14CX7 972 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 C16orf72Q14CZ0 275 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 KBTBD12Q3ZCT8 623 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 DCAF12Q5T6F0 453 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 ARHGAP40Q5TG30 622 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 ANKS6Q68DC2 871 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 CEACAM20Q6UY09 585 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 TRMT10CQ7L0Y3 403 aaKnown RBP10.92□□□□□ -0.66
SF3B6-201ENST00000233468 CCDC91Q7Z6B0 441 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 CPNE9Q8IYJ1 553 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 PPM1NQ8N819 430 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 OR9A1PQ8NGU1 263 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 OR2L8Q8NGY9 312 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 JPH3Q8WXH2 748 aaPredicted RBP10.92□□□□□ -0.66
SF3B6-201ENST00000233468 ASB11Q8WXH4 323 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 KLHL6Q8WZ60 621 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 ANKRD7Q92527 254 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 SPSB2Q99619 263 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 TMUB1Q9BVT8 246 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 DDA1Q9BW61 102 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 SEMA4CQ9C0C4 833 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 FANCEQ9HB96 536 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 FBXO8Q9NRD0 319 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 INTS7Q9NVH2 962 aaKnown RBP10.92□□□□□ -0.66
SF3B6-201ENST00000233468 SLC39A1Q9NY26 324 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 ACTR10Q9NZ32 417 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 TMEM9Q9P0T7 183 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 SEMA5BQ9P283 1151 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 GALPQ9UBC7 116 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 POMT2Q9UKY4 750 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 ICKQ9UPZ9 632 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 MED16Q9Y2X0 877 aa10.92□□□□□ -0.66
SF3B6-201ENST00000233468 A0A087WUV0 522 aaPredicted RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 TEX51A0A1B0GUA7 166 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 ISM1B1AKI9 464 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 GFYI3L273 518 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 BTN3A3O00478 584 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 BTN3A1O00481 513 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms