RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 A0A1W2PRB8 838 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 ITM2AO43736 263 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 ATP5A1P25705 553 aaKnown RBP11.33□□□□□ -0.6
LAMA4-201ENST00000230538 NRLP54845 237 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 SEMG2Q02383 582 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 DRICH1Q6PGQ1 229 aaPredicted RBP11.33□□□□□ -0.6
LAMA4-201ENST00000230538 ABHD13Q7L211 337 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 C7orf61Q8IZ16 206 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 OXR1Q8N573 874 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 CLEC4DQ8WXI8 215 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 CDK15Q96Q40 435 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 HAPLN3Q96S86 360 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 OSBPL7Q9BZF2 842 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 TCRBV7S3A2A0A539 114 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 PGLSO95336 258 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 CHRM5P08912 532 aaPredicted RBP11.32□□□□□ -0.6
LAMA4-201ENST00000230538 RNF121Q9H920 327 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 C12orf4Q9NQ89 552 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 PAK6Q9NQU5 681 aaPredicted RBP11.32□□□□□ -0.6
LAMA4-201ENST00000230538 PNO1Q9NRX1 252 aaKnown RBP11.32□□□□□ -0.6
LAMA4-201ENST00000230538 CNTN3Q9P232 1028 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 CLDN25C9JDP6 229 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 SLC10A7Q0GE19 358 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 DPY19L1Q2PZI1 675 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 IQCCQ4KMZ1 466 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 TRMT10BQ6PF06 316 aaKnown RBP11.32□□□□□ -0.6
LAMA4-201ENST00000230538 PIGWQ7Z7B1 504 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 C10orf82Q8WW14 230 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 CTPS2Q9NRF8 586 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 GMEB1Q9Y692 573 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 LINGO3P0C6S8 592 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 TIE1P35590 1138 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 HSD17B2P37059 387 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 ALG1LQ6GMV1 187 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 MBOAT1Q6ZNC8 495 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 CHERPQ8IWX8 916 aaKnown RBP11.32□□□□□ -0.6
LAMA4-201ENST00000230538 GHDCQ8N2G8 530 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 TMEM145Q8NBT3 493 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 KREMEN2Q8NCW0 462 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 TTLQ8NG68 377 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 KXD1Q9BQD3 176 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 SIRPGQ9P1W8 387 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 POMPQ9Y244 141 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 MRPS17Q9Y2R5 130 aaKnown RBP11.32□□□□□ -0.6
LAMA4-201ENST00000230538 RPL36Q9Y3U8 105 aaKnown RBP11.32□□□□□ -0.6
LAMA4-201ENST00000230538 SOWAHBA6NEL2 793 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 ELOA3DA6NLF2 546 aaPredicted RBP11.32□□□□□ -0.6
LAMA4-201ENST00000230538 EFCAB9A8MZ26 197 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 PRH1P02810 166 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 MTHFD1P11586 935 aaKnown RBP11.32□□□□□ -0.6
LAMA4-201ENST00000230538 PGAM2P15259 253 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 ZNF20P17024 532 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 UGT1A3P35503 534 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 ERVK-8P63133 956 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 SLC10A6Q3KNW5 377 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 ELOA3BQ3SY89 546 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 FAM182AQ5T1J6 154 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 DCAF12L1Q5VU92 463 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 ELOA3Q8NG57 546 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 ZFP3Q96NJ6 502 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 CYP2S1Q96SQ9 504 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 FAM129BQ96TA1 746 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 SLC39A3Q9BRY0 314 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 CHIAQ9BZP6 476 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 ZNF639Q9UID6 485 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 TELO2Q9Y4R8 837 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 FOXN2P32314 431 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 BLKP51451 505 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 RASGEF1AQ8N9B8 481 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 SCAMP5Q8TAC9 235 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 HCAR2Q8TDS4 363 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 MIPEPQ99797 713 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 COMMD3Q9UBI1 195 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 CACNG4Q9UBN1 327 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 RIMKLBQ9ULI2 386 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 BAIAP2Q9UQB8 552 aa11.32□□□□□ -0.6
LAMA4-201ENST00000230538 CPNE3O75131 537 aaKnown RBP11.31□□□□□ -0.6
LAMA4-201ENST00000230538 ZBTB48P10074 688 aaPredicted RBP11.31□□□□□ -0.6
LAMA4-201ENST00000230538 XKP51811 444 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 GBX2P52951 348 aaPredicted RBP11.31□□□□□ -0.6
LAMA4-201ENST00000230538 LRRC32Q14392 662 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 SLC9A4Q6AI14 798 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 ZNF627Q7L945 461 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 KLHL36Q8N4N3 616 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 OR13C4Q8NGS5 318 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 ARMC5Q96C12 935 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 TMEM150CB9EJG8 249 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 HADHBP55084 474 aaKnown RBP11.31□□□□□ -0.6
LAMA4-201ENST00000230538 CSTF1Q05048 431 aaKnown RBP11.31□□□□□ -0.6
LAMA4-201ENST00000230538 DPYSL2Q16555 572 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 SYVN1Q86TM6 617 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 ANKFN1Q8N957 763 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 ZNF548Q8NEK5 533 aaPredicted RBP11.31□□□□□ -0.6
LAMA4-201ENST00000230538 POLR2J3Q9H1A7 115 aaKnown RBP11.31□□□□□ -0.6
LAMA4-201ENST00000230538 ANKRA2Q9H9E1 313 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 MCCC2Q9HCC0 563 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 C3P01024 1663 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 TOR1BO14657 336 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 OR1I1O60431 355 aa11.31□□□□□ -0.6
LAMA4-201ENST00000230538 PRKCGP05129 697 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms