RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 LINGO3P0C6S8 592 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF3P17036 446 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 GNAZP19086 355 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 PYHIN1Q6K0P9 492 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 MBOAT1Q6ZNC8 495 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CPT1BQ92523 772 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 RGMAQ96B86 450 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 SDCBP2Q9H190 292 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 SDHAF3Q9NRP4 125 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 NPIPA1Q9UND3 350 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 SALL3Q9BXA9 1300 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 DAPL1A0PJW8 107 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 EIF1AYO14602 144 aaKnown RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 BDKRB1P46663 353 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 RPL5P46777 297 aaKnown RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 LAPTM4BQ86VI4 370 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 ZZZ3Q8IYH5 903 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF366Q8N895 744 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 CDK15Q96Q40 435 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 CHCHD6Q9BRQ6 235 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 BTBD1Q9H0C5 482 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 FKBP14Q9NWM8 211 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF639Q9UID6 485 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 FAM149AA5PLN7 773 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 JMJD7P0C870 316 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 RPS9P46781 194 aaKnown RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 CRISP3P54108 245 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 ARL13AQ5H913 290 aaPredicted RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 TMEM126BQ8IUX1 230 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 DUSP26Q9BV47 211 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 PLAGL1Q9UM63 463 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 EDDM13A0A1B0GTR0 161 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 EDF1O60869 148 aaKnown RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 RPS14P62263 151 aaKnown RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 FASTKD3Q14CZ7 662 aaKnown RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 PRKD1Q15139 912 aaPredicted RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 FIP1L1Q6UN15 594 aaKnown RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 PTF1AQ7RTS3 328 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 SLC30A8Q8IWU4 369 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 PNLDC1Q8NA58 520 aaKnown RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 TMEM125Q96AQ2 219 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 CCM2Q9BSQ5 444 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 MED28Q9H204 178 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 C12orf65Q9H3J6 166 aaKnown RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 CDC7O00311 574 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 TBX18O95935 607 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 ETS2P15036 469 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 CLCN4P51793 760 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 ADAM8P78325 824 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 RFTN1Q14699 578 aaPredicted RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 TIGD5Q53EQ6 642 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 PRAMEF14Q5SWL7 426 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 PRAMEF13Q5VWM6 474 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 C8orf48Q96LL4 319 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 ASB3Q9Y575 518 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 A0A1W2PRB8 838 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 SLC1A2P43004 574 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 OR3A3P47888 321 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 OR3A2P47893 321 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 CD47Q08722 323 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 METTL21CQ5VZV1 264 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 FSTL4Q6MZW2 842 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 LRRTM4Q86VH4 590 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 ZDHHC21Q8IVQ6 265 aa12.98□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF548Q8NEK5 533 aaPredicted RBP12.98□□□□□ -0.33
COL1A1-201ENST00000225964 S100A6P06703 90 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 CD2P06729 351 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 UGT1A3P35503 534 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 CHRNA4P43681 627 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 PER3P56645 1201 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 TEAD2Q15562 447 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 KLHL26Q53HC5 615 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 ANKRD22Q5VYY1 191 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF781Q8N8C0 355 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 C8orf4Q9NR00 106 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 TLR9Q9NR96 1032 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 PRORSD1PA6NEY8 169 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 GRXCR2A6NFK2 248 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 L7N2F9 121 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 AXIN1O15169 862 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 MID1O15344 667 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 NOBOXO60393 691 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 GSTT2BP0CG30 244 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 VIPR1P32241 457 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 CLCNKAP51800 687 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 VAMP2P63027 116 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 YIPF1Q9Y548 306 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 PCDHGB7Q9Y5F8 929 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 MTX2O75431 263 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 SCELO95171 688 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 BPNT1O95861 308 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 HEXBP07686 556 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 HOXB2P14652 356 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 TLE2Q04725 743 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 FAM174BQ3ZCQ3 159 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 SLC9B2Q86UD5 537 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 CAMKVQ8NCB2 501 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 ADAD1Q96M93 576 aaKnown RBP12.97□□□□□ -0.33
COL1A1-201ENST00000225964 RIMKLBQ9ULI2 386 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms