RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 SQSTM1Q13501 440 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 SNAP47Q5SQN1 464 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 IRGCQ6NXR0 463 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 LRIG3Q6UXM1 1119 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 FRA10AC1Q70Z53 315 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 ADAMTSL2Q86TH1 951 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 OR2L8Q8NGY9 312 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 CCDC138Q96M89 665 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 TGM7Q96PF1 710 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 TRIM54Q9BYV2 358 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 LNPEPQ9UIQ6 1025 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 NOVA2Q9UNW9 492 aaKnown RBP14.53□□□□□ -0.08
RPA3-201ENST00000223129 OARD1Q9Y530 152 aa14.53□□□□□ -0.08
RPA3-201ENST00000223129 GSAPA4D1B5 854 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 D6RAR5 112 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 AGRPO00253 132 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 KIF1CO43896 1103 aaKnown RBP14.52□□□□□ -0.09
RPA3-201ENST00000223129 CHRM5P08912 532 aaPredicted RBP14.52□□□□□ -0.09
RPA3-201ENST00000223129 ENO2P09104 434 aaPredicted RBP14.52□□□□□ -0.09
RPA3-201ENST00000223129 IMPA1P29218 277 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 PEBP1P30086 187 aaKnown RBP14.52□□□□□ -0.09
RPA3-201ENST00000223129 ACAP2Q15057 778 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 TGFBIQ15582 683 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 ZXDCQ2QGD7 858 aaPredicted RBP14.52□□□□□ -0.09
RPA3-201ENST00000223129 HES3Q5TGS1 186 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 TMEM71Q6P5X7 295 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 KLHL35Q6PF15 583 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 SUSD1Q6UWL2 747 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 FAM92BQ6ZTR7 304 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 B3GNT8Q7Z7M8 397 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 GPSM1Q86YR5 675 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 C4orf33Q8N1A6 199 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 STAG3L4Q8TBR4 150 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 EXT2Q93063 718 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 CABS1Q96KC9 395 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 PPM1MQ96MI6 270 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 ATG10Q9H0Y0 220 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 CENPHQ9H3R5 247 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 SEMA6CQ9H3T2 930 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 EPB41L1Q9H4G0 881 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 ABCF3Q9NUQ8 709 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 OR6C2Q9NZP2 312 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 SPATA7Q9P0W8 599 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 STOX2Q9P2F5 926 aaPredicted RBP14.52□□□□□ -0.09
RPA3-201ENST00000223129 RNF112Q9ULX5 631 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 COL27A1Q8IZC6 1860 aaPredicted RBP14.52□□□□□ -0.09
RPA3-201ENST00000223129 SPTBN4Q9H254 2564 aa14.52□□□□□ -0.09
RPA3-201ENST00000223129 PIPSLA2A3N6 862 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 FAM221BA6H8Z2 402 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 A8MU76 341 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 COL6A2P12110 1019 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 KRT4P19013 534 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 PDX1P52945 283 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 PNLIPRP1P54315 467 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 PRKAA1Q13131 559 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 TSTA3Q13630 321 aaPredicted RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 CYP2A13Q16696 494 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 N4BP2L1Q5TBK1 243 aaPredicted RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 ANKS6Q68DC2 871 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 ARMC6Q6NXE6 501 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 WDR74Q6RFH5 385 aaPredicted RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 TRABD2AQ86V40 505 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 MARCH9Q86YJ5 346 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 FAM20CQ8IXL6 584 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 SYTL1Q8IYJ3 562 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 RAB42Q8N4Z0 105 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 ACMSDQ8TDX5 336 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 SCYL1Q96KG9 808 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 ATOH8Q96SQ7 321 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 FAM53CQ9NYF3 392 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 ACTR10Q9NZ32 417 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 TMEM216Q9P0N5 145 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 IGHV5-10-1A0A0J9YXX1 117 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 PABPN1LA6NDY0 278 aaKnown RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 ISM1B1AKI9 464 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 E7ENX8 843 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 RGS16O15492 202 aaPredicted RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 MT-CO3P00414 261 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 ERGP11308 486 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 CDK4P11802 303 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 PRDX3P30048 256 aaKnown RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 KPNA2P52292 529 aaKnown RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 AP1S2P56377 157 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 TAP2Q03519 686 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 C18orf21Q32NC0 220 aaPredicted RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 FBXO48Q5FWF7 155 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 CDCP2Q5VXM1 449 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 C16orf46Q6P387 395 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 KLC3Q6P597 504 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 AGTRAPQ6RW13 159 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 RBM44Q6ZP01 1051 aaKnown RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 PLXDC1Q8IUK5 500 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 SRRM1Q8IYB3 904 aaKnown RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 LRRC56Q8IYG6 542 aaPredicted RBP14.51□□□□□ -0.09
RPA3-201ENST00000223129 CHCHD4Q8N4Q1 142 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 WDR48Q8TAF3 677 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 ADAMTS14Q8WXS8 1223 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 TSNARE1Q96NA8 513 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 EGFL8Q99944 293 aa14.51□□□□□ -0.09
RPA3-201ENST00000223129 RAB11FIP5Q9BXF6 653 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms