RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 NPAS4Q8IUM7 802 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 RBFAQ8N0V3 343 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 PARP8Q8N3A8 854 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 OR6K2Q8NGY2 324 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 PYURFQ96I23 114 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 ZNF347Q96SE7 839 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 INPP5KQ9BT40 448 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 MAGEE1Q9HCI5 957 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 C1orf109Q9NX04 203 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 VNN3Q9NY84 501 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 NAALAD2Q9Y3Q0 740 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 ZNF840PA6NDX5 716 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 SLC16A6O15403 523 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 WDR47O94967 919 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 B3GALT4O96024 378 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 EBLN1P0CF75 366 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 RYKP34925 604 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 KCNC4Q03721 635 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 OCA2Q04671 838 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 EMX1Q04741 257 aaPredicted RBP16.86■□□□□ 0.29
USB1-201ENST00000219281 LAPTM4AQ15012 233 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 ADGRF1Q5T601 910 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 CES5AQ6NT32 575 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 HIPK1Q86Z02 1210 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 PLPP6Q8IY26 295 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 ZBTB2Q8N680 514 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 PLD4Q96BZ4 506 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 CPPED1Q9BRF8 314 aaPredicted RBP16.86■□□□□ 0.29
USB1-201ENST00000219281 NTMT1Q9BV86 223 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 TRNAU1APQ9NX07 287 aaKnown RBP16.86■□□□□ 0.29
USB1-201ENST00000219281 AASSQ9UDR5 926 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 TRPS1Q9UHF7 1281 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 AP3M1Q9Y2T2 418 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 LAMA2P24043 3122 aaKnown RBP16.86■□□□□ 0.29
USB1-201ENST00000219281 TOR1BO14657 336 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 PQBP1O60828 265 aaKnown RBP16.86■□□□□ 0.29
USB1-201ENST00000219281 FKTNO75072 461 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 UGT2B11O75310 529 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 SERPINB7O75635 380 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 FTH1P02794 183 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 EPB42P16452 691 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 CDH3P22223 829 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 IL1RL1Q01638 556 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 ARHGEF7Q14155 803 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 ARMC12Q5T9G4 340 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 CHPFQ8IZ52 775 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 FAR1Q8WVX9 515 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 MYO19Q96H55 970 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 BARD1Q99728 777 aaKnown RBP16.86■□□□□ 0.29
USB1-201ENST00000219281 TTPALQ9BTX7 342 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 TM6SF2Q9BZW4 377 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 TRIT1Q9H3H1 467 aaKnown RBP16.86■□□□□ 0.29
USB1-201ENST00000219281 CWH43Q9H720 699 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 SERHLQ9NQF3 203 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 ASIC5Q9NY37 505 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 DLGAP4Q9Y2H0 992 aa16.86■□□□□ 0.29
USB1-201ENST00000219281 CLDN25C9JDP6 229 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 ERN1O75460 977 aaKnown RBP16.85■□□□□ 0.29
USB1-201ENST00000219281 ANGPTL1O95841 491 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 FMO3P31513 532 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 VEGFBP49765 207 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 CCL23P55773 120 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 RPS14P62263 151 aaKnown RBP16.85■□□□□ 0.29
USB1-201ENST00000219281 SMARCB1Q12824 385 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 NFATC2Q13469 925 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 ZNF846Q147U1 533 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 CPSF6Q16630 551 aaKnown RBP eCLIP16.85■□□□□ 0.29
USB1-201ENST00000219281 SNX20Q7Z614 316 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 SLCO6A1Q86UG4 719 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 MCOLN3Q8TDD5 553 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 PIH1D2Q8WWB5 315 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 USP7Q93009 1102 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 NEURL2Q9BR09 285 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 ACPTQ9BZG2 426 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 KCNH6Q9H252 994 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 LATS2Q9NRM7 1088 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 ERVK-18Q9QC07 812 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 K7ERQ8 282 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 DNAJB5O75953 348 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 RECQL5O94762 991 aaPredicted RBP16.85■□□□□ 0.29
USB1-201ENST00000219281 PGLSO95336 258 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 CCDC159P0C7I6 412 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 CYP4B1P13584 511 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 IGFBP5P24593 272 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 S100A3P33764 101 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 CDKN2CP42773 168 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 MAP2K4P45985 399 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 SIM2Q14190 667 aaPredicted RBP16.85■□□□□ 0.29
USB1-201ENST00000219281 TRIM16LQ309B1 348 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 PGS1Q32NB8 556 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 GPRC6AQ5T6X5 926 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 RNF165Q6ZSG1 346 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 ANKS3Q6ZW76 656 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 CYP4Z1Q86W10 505 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 ZDHHC21Q8IVQ6 265 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 TMEM132CQ8N3T6 1108 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 CEP295NLQ96MC4 621 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 RNF38Q9H0F5 515 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 TNKS2Q9H2K2 1166 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 RIBC2Q9H4K1 309 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms