RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 BTBD10Q9BSF8 475 aa9.71□□□□□ -0.86
RTCB-201ENST00000216038 YIPF2Q9BWQ6 316 aa9.71□□□□□ -0.86
RTCB-201ENST00000216038 WWP1Q9H0M0 922 aa9.71□□□□□ -0.86
RTCB-201ENST00000216038 OR52A5Q9H2C5 316 aa9.71□□□□□ -0.86
RTCB-201ENST00000216038 SSU72Q9NP77 194 aaKnown RBP9.71□□□□□ -0.86
RTCB-201ENST00000216038 SMG5Q9UPR3 1016 aaKnown RBP9.71□□□□□ -0.86
RTCB-201ENST00000216038 OTOGLQ3ZCN5 2332 aa9.71□□□□□ -0.86
RTCB-201ENST00000216038 PRAMEF33A0A0G2JMD5 474 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 UBXN8O00124 270 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 HNRNPRO43390 633 aaKnown RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 PLIN3O60664 434 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 GUCA1CO95843 209 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 PROCP04070 461 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 CSF2P04141 144 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 SLC35G4P0C7Q5 338 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 VCLP18206 1134 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 KCNA4P22459 653 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 SLC26A3P40879 764 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 WDR4P57081 412 aaKnown RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 ILF3Q12906 894 aaKnown RBP eCLIP9.7□□□□□ -0.86
RTCB-201ENST00000216038 ACAP2Q15057 778 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 PHKG1Q16816 387 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 TECRLQ5HYJ1 363 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 SBSNQ6UWP8 590 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 MBOAT1Q6ZNC8 495 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 ACAD11Q709F0 780 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 TAF8Q7Z7C8 310 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 OR2I1PQ8NGU4 316 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 DENND1AQ8TEH3 1009 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 GLMNQ92990 594 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 NRTNQ99748 197 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 LRRC61Q9BV99 259 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 ARRDC1-AS1Q9H2J1 176 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 MKS1Q9NXB0 559 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 SCHIP1Q9P0W5 487 aaPredicted RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 RNF112Q9ULX5 631 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 DNMT3AQ9Y6K1 912 aaPredicted RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 A0A0J9YVX5 310 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 HNRNPCP07910 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
RTCB-201ENST00000216038 CBSLP0DN79 551 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 ENO3P13929 434 aaPredicted RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 NME1P15531 152 aaKnown RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 IDSP22304 550 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 CBSP35520 551 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 ETV4P43268 484 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 BDKRB1P46663 353 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 ATP6V0D1P61421 351 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 PRKG2Q13237 762 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 CLCA4Q14CN2 919 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 CCSMST1Q4G0I0 132 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 TRIM61Q5EBN2 209 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 TCEAL6Q6IPX3 200 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 NCCRP1Q6ZVX7 275 aaPredicted RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 UBE2R2Q712K3 238 aaPredicted RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 LMNTD1Q8N9Z9 388 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 OR5AR1Q8NGP9 310 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 LMX1AQ8TE12 382 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 PATE1Q8WXA2 126 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 ASB11Q8WXH4 323 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 TCEAL3Q969E4 200 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 KIAA1191Q96A73 305 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 SKA1Q96BD8 255 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 PHF21BQ96EK2 531 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 PDLIM5Q96HC4 596 aaKnown RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 MRPL57Q9BQC6 102 aaKnown RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 MRPL46Q9H2W6 279 aaKnown RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 IMP3Q9NV31 184 aaKnown RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 UCKL1Q9NWZ5 548 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 TRNAU1APQ9NX07 287 aaKnown RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 TUBA8Q9NY65 449 aaPredicted RBP9.7□□□□□ -0.86
RTCB-201ENST00000216038 SPATA7Q9P0W8 599 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 KLHL42Q9P2K6 505 aa9.7□□□□□ -0.86
RTCB-201ENST00000216038 ASXL3Q9C0F0 2248 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 PRR5-ARHGAP8B1AHC4 643 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 SUPT3HB4E1H0 165 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 TM9SF1O15321 606 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 SUPT3HO75486 399 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 MATN4O95460 622 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 TROVE2P10155 538 aaKnown RBP eCLIP9.69□□□□□ -0.86
RTCB-201ENST00000216038 ACADLP28330 430 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 CTSKP43235 329 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 BLKP51451 505 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 SESN3P58005 492 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 DMPKQ09013 629 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 TCF15Q12870 199 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 BNIP3Q12983 259 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 GRIK2Q13002 908 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 LRP8Q14114 963 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 SPIDRQ14159 915 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 CCDC153Q494R4 210 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 FRA10AC1Q70Z53 315 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 PDZD3Q86UT5 571 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 GPSM1Q86YR5 675 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 PRSS33Q8NF86 280 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 STAG3L4Q8TBR4 150 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 GPBAR1Q8TDU6 330 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 TFGQ92734 400 aaPredicted RBP9.69□□□□□ -0.86
RTCB-201ENST00000216038 ESAMQ96AP7 390 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 C12orf66Q96MD2 445 aa9.69□□□□□ -0.86
RTCB-201ENST00000216038 ATOH8Q96SQ7 321 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms