RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 MGME1Q9BQP7 344 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 CCSER2Q9H7U1 834 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 PDFQ9HBH1 243 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 WWOXQ9NZC7 414 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ZNF490Q9ULM2 529 aaPredicted RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 PKP3Q9Y446 797 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 GPSM3Q9Y4H4 160 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 PSMD11O00231 422 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 RAD51BO15315 384 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 B4GALT3O60512 393 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 TMCC2O75069 709 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ULK1O75385 1050 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 TYMPP19971 482 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 SERPINB1P30740 379 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 GNPDA1P46926 289 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 OR1G1P47890 313 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 MASP1P48740 699 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 MAPKAPK2P49137 400 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 RPS24P62847 133 aaKnown RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ACOX1Q15067 660 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 CARD16Q5EG05 197 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 SUSD1Q6UWL2 747 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 USP43Q70EL4 1123 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 GPR149Q86SP6 731 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ZNF280BQ86YH2 543 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 SETD9Q8NE22 299 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ZNF641Q96N77 438 aaPredicted RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 PRDM8Q9NQV8 689 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 TMEM45AQ9NWC5 275 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 C1orf109Q9NX04 203 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 MYO16Q9Y6X6 1858 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 H0Y626 953 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 hCG_2039718K7EN88 272 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 SLC16A6O15403 523 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 DNAJB5O75953 348 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 TRIM16O95361 564 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 CD6P30203 668 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 SEPHS1P49903 392 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 TWF1Q12792 350 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 MAP2K5Q13163 448 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ARHGEF6Q15052 776 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 PCBP2Q15366 365 aaKnown RBP eCLIP10.28□□□□□ -0.763e-12■■■□□ 16.5
CX3CL1-201ENST00000006053 HIST2H2ACQ16777 129 aaPredicted RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 FAM110CQ1W6H9 321 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 RFX4Q33E94 735 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 AGAP7PQ5VUJ5 663 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 SBSNQ6UWP8 590 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 CEP68Q76N32 757 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ADAMTSL2Q86TH1 951 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 PAF1Q8N7H5 531 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 OR7G1Q8NGA0 311 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 UBE2FQ969M7 185 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 PYURFQ96I23 114 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 SEPT5Q99719 369 aaPredicted RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 KAT8Q9H7Z6 458 aaKnown RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 LRTM1Q9HBL6 345 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 NECTIN3Q9NQS3 549 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ELOVL2Q9NXB9 296 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 AGO1Q9UL18 857 aaKnown RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 NAALAD2Q9Y3Q0 740 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ZFP37Q9Y6Q3 630 aaPredicted RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 NUP214P35658 2090 aaPredicted RBP10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 MOXD2PA6NHM9 499 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 PER2O15055 1255 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 RECQL5O94762 991 aaPredicted RBP10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 LRATO95237 230 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 IL6P05231 212 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 CLK3P49761 638 aaKnown RBP10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 SYT16Q17RD7 645 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 PRR23CQ6ZRP0 262 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 RGL4Q8IZJ4 473 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 TSSK3Q96PN8 268 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 PSKH2Q96QS6 385 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 INPP5KQ9BT40 448 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 CIPCQ9C0C6 399 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 ABCG2Q9UNQ0 655 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 NOD1Q9Y239 953 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 ATP11BQ9Y2G3 1177 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 PCDHB5Q9Y5E4 795 aa10.27□□□□□ -0.76
CX3CL1-201ENST00000006053 A0A0U1RQF3 1178 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 ZSCAN5BA6NJL1 495 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 ANKRD66B4E2M5 251 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 RGS10O43665 173 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 ESR1P03372 595 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 LCKP06239 509 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 CTPS1P17812 591 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 EPHA2P29317 976 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 CLK1P49759 484 aaKnown RBP10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 DAPP51397 102 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 CLCN7P51798 805 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 ARHGDIAP52565 204 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 HTRA3P83110 453 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 CPSF6Q16630 551 aaKnown RBP eCLIP10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 LINGO4Q6UY18 593 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 AHSA2Q719I0 299 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 MINDY2Q8NBR6 621 aa10.27□□□□□ -0.77
CX3CL1-201ENST00000006053 MCFD2Q8NI22 146 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms