RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Apba2P98084 750 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fgl1Q71KU9 314 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Q8BR90 294 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Slc35f5Q8R314 524 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm12394A2AKP6 982 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Q3UST5 385 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Dnajb13Q80Y75 316 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 PpcdcQ8BZB2 204 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Glis1Q8K1M4 789 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Q91Z58 1206 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Sppl2aQ9JJF9 523 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Nt5cQ9JM14 200 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm7929A0A286YDV3 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Spin2dB1B0R2 236 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm21977F6U3N7 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8247F6VRJ8 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8005F6YKY3 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm3015F6ZAP6 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8212F6ZMY5 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm7954F7BAX1 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8138F7BY56 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8232F7CFJ3 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm17079F7D8Y4 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8094K7N6U8 211 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8165L7N218 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8122L7N2C7 213 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm17078M0QW51 211 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Art5P70352 309 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 SmsP97355 366 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Acss3Q14DH7 682 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Mat2bQ99LB6 334 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Vmn2r17E9PYF5 849 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cbx4O55187 551 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Nell2Q61220 819 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Olfr952Q8VFD7 314 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Slc12a9Q99MR3 914 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cers1P27545 350 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cpne7Q0VE82 557 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Adamts16Q69Z28 1222 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fam136aQ9CR98 138 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Mrpl17Q9D8P4 176 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tspan4Q9DCK3 238 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Smok1Q9QYZ4 484 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm16494E9Q2Z4 87 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Obox6G3X9U1 347 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ltb4rO88855 351 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cst14Q8VII3 130 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tcf7l2Q924A0 459 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Dsn1Q9CYC5 348 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tomm20lQ9D4V6 152 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Q9D979 236 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Arl6ip1Q9JKW0 203 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp949E9Q732 603 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Plekhf1Q3TB82 279 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Hyal5Q812F3 526 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Kctd7Q8BJK1 289 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pcdha8Q91Y12 946 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cdh22Q9WTP5 813 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Wnt10bP48614 389 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ap2s1P62743 142 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 ErfP70459 551 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 PdgfrlQ6PE55 375 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Nhlrc2Q8BZW8 725 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pcdhb18Q91Y02 792 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 HhatlQ9D1G3 503 aa16.3■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Defb34Q7TNV8 81 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gxylt2Q810K9 444 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp719Q8BIV1 735 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Syn3Q8JZP2 579 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Slc5a3Q9JKZ2 718 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Spaca5A2AE20 160 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Vmn1r39G3UWE6 305 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fbln1Q08879 705 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ntan1Q64311 310 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Olfr1313Q7TQW8 311 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Rgs17Q9QZB0 210 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cyp4a29A0A087WPC3 509 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Matn2O08746 956 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cdkn2cQ60772 168 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cand1Q6ZQ38 1230 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Prokr2Q8K458 381 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Hid1Q8R1F6 788 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Jph3Q9ET77 744 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tcf7l1Q9Z1J1 584 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gria2P23819 883 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Adamts15P59384 950 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Meis2P97367 477 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Abcg4Q91WA9 646 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pnp2Q9D8C9 305 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Znf318Q99PP2 2237 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Arl6O88848 186 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Aimp2Q8R010 320 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Nck1Q99M51 377 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ca5bQ9QZA0 317 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 HephQ9Z0Z4 1157 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm14147A2AQX6 640 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 H2-Q8P14430 326 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 H2-Q6P79568 326 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Atf4Q06507 349 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Sult5a1Q91X36 291 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 58.5 ms