RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Stk16O88697 305 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ctla2aP12399 137 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Pax3P24610 479 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rps24P62849 133 aaKnown RBP11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cxcr5Q04683 374 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Bpifa6Q0VGU8 367 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Trpc5osQ3UHV4 110 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 RhocQ62159 193 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Trim45Q6PFY8 580 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cyp20a1Q8BKE6 462 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cdh7Q8BM92 785 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Mfsd6Q8CBH5 775 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Slc45a3Q8K0H7 553 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vmn1r22Q8R2D1 302 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Camkk1Q8VBY2 505 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Kif12Q9D2Z8 642 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tmem245B1AZA5 876 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 9230113P08RikD3YWX3 137 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr543E9PWI5 336 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vmn2r114E9Q281 856 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr171G5E8J1 314 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Serpinb9eO08806 377 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Odc1P00860 461 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 ItgamP05555 1153 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Atoh1P48985 351 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 MlipQ5FW52 269 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Map4k2Q61161 821 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Lacc1Q8BZT9 430 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Psapl1Q8C1C1 522 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cox10Q8CFY5 443 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vmn1r30Q8R2D2 302 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zcchc14Q8VIG0 956 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 D10Jhu81eQ9D172 266 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 NtsQ9D3P9 169 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Glod5Q9D8I3 148 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Slc25a13Q9QXX4 676 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vnn3Q9QZ25 500 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Shroom3Q9QXN0 1986 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Kctd17E0CYQ0 296 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm2956E9PVJ0 216 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm5796E9Q7M8 205 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm3629K7N6Y2 205 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm10340K7N708 205 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm8108K7N734 216 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Arpc4P59999 168 aaKnown RBP11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gpr15Q0VDU3 360 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 H2-M3Q31093 336 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 PomkQ3TUA9 349 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Trpv1Q704Y3 839 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr366Q7TRY4 309 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 DglucyQ8BH86 617 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 SntnQ8C9X1 147 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 GneQ91WG8 722 aaKnown RBP11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 KmoQ91WN4 479 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Adad2Q9D5P4 478 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dusp26Q9D700 211 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Slc25a14Q9Z2B2 325 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zfp626A0A0U1RQ84 676 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fam43bA2AM80 330 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm28048F7BCN0 99 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ncam2O35136 837 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fgf10O35565 209 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cd19P25918 547 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Il11ra2P70225 432 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rpl10lP86048 214 aaKnown RBP11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 TekQ02858 1122 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tigd2Q0VBL1 525 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Il18r1Q61098 537 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tnpo3Q6P2B1 923 aaKnown RBP11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cd300lfQ6SJQ7 337 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gpr22Q8BZL4 432 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Txndc17Q9CQM5 123 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 PyurfQ9D1C3 112 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Hm13Q9D8V0 378 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Scn4aQ9ER60 1841 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fbxo47A2A6H3 451 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr620E9PZ66 313 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vmn2r21K7N6Y7 853 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vmn2r20L7N2B1 853 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm17174M0QWQ9 212 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Prkag1O54950 330 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Laptm4aQ60961 233 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ldoc1Q7TPY9 151 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zc3h14Q8BJ05 735 aaKnown RBP11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Taf10Q8K0H5 218 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Pnpla8Q8K1N1 776 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Znf622Q91VY9 476 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fis1Q9CQ92 152 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 RhoaQ9QUI0 193 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ak1Q9R0Y5 194 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm13276A0A087WR18 182 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm21885A0A286YDN8 145 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fam166bA2AIP0 273 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cyp8b1O88962 500 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tacr2P30549 384 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Arhgap39P59281 1107 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Scn4bQ7M729 228 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Sdr16c5Q7TQA3 309 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rgs7bpQ8BQP9 257 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Abhd18Q8C1A9 464 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms