RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Hacd2Q9D3B1 254 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Dap3Q9ER88 391 aaKnown RBP10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Tcea2Q9QVN7 299 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 2610008E11RikG3X964 669 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Ldb2O55203 373 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Lim2P56563 173 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 IdsQ08890 552 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Bpifa6Q0VGU8 367 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Pyroxd2Q3U4I7 581 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 StimateQ3UF25 288 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Coq8bQ566J8 533 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Rasa4Q6PFQ7 802 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Zfyve1Q810J8 777 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Teddm1bQ8CC62 306 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Ppwd1Q8CEC6 646 aaKnown RBP10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Pih1d2Q8CHR9 315 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Lrrc56Q8K375 552 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Olfr691Q8VGW5 322 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Pth2rQ91V95 546 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Aldh1b1Q9CZS1 519 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Mrpl28Q9D1B9 257 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Oser1Q9D722 291 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Cyp2c55Q9D816 490 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Wfdc1Q9ESH5 211 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Asah2Q9JHE3 756 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 NrapQ80XB4 1728 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Numa1E9Q7G0 2094 aaKnown RBP10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Skint11A7XV14 364 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Kbtbd6E9PYD7 486 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Cdh18E9Q9Q6 790 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Kbtbd7G5E8C2 690 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gjd2O54851 321 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 F10O88947 481 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Pmp22P16646 161 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Etv4P28322 485 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 FynP39688 537 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 St14P56677 855 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Kcnk2P97438 426 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Ccbe1Q3MI99 408 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Rars2Q3U186 578 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Elmod1Q3V1U8 326 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Zc3h12aQ5D1E7 596 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Clec2eQ80XD9 204 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Clec1aQ8BWY2 269 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Ston1Q8CDJ8 730 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Bdh2Q8JZV9 245 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Scamp1Q8K021 338 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Slc22a22Q8R0S9 554 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Mat2bQ99LB6 334 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Satl1Q9D5N8 744 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 AcadsbQ9DBL1 432 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Pld1Q9Z280 1074 aa10.47□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Nlrp1bA1Z198 1177 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Skint3A7TZF0 458 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Clip3B9EHT4 547 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Vmn2r96E9PZU5 664 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Vmn2r114E9Q281 856 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Zfr2E9Q5M4 874 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Kpna6O35345 536 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Suv39h1O54864 412 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Cbx4O55187 551 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Cyp8b1O88962 500 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Lingo4Q149C3 593 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Opa3Q505D7 179 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Epha1Q60750 977 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Fstl1Q62356 306 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Tlr12Q6QNU9 906 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 AY358078Q6UY53 465 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Zc3hc1Q80YV2 501 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Usp43Q8BUM9 1132 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Slc46a2Q8CA03 479 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Ints10Q8K2A7 710 aaKnown RBP10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Dclre1cQ8K4J0 705 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 GneQ91WG8 722 aaKnown RBP10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Zdhhc7Q91WU6 308 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Pcdhac1Q91Y10 964 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 AdprmQ99KS6 340 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Ska1Q9CPV1 254 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Wdr45bQ9CR39 344 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gemin6Q9CX53 166 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Mgrn1Q9D074 532 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 2010005H15RikQ9D8D6 97 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm29106A0A087WSP8 697 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm7929A0A286YDV3 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Fam124aD3Z5V4 536 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Vmn2r90E9PXJ8 863 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Arhgap40E9Q6X9 672 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Rnf169E9Q7F2 694 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm21977F6U3N7 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm8247F6VRJ8 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm8005F6YKY3 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm3015F6ZAP6 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm8212F6ZMY5 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm7954F7BAX1 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm8138F7BY56 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm8232F7CFJ3 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm17079F7D8Y4 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm8165L7N218 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm8122L7N2C7 213 aa10.46□□□□□ -0.73
Rnf40-201ENSMUST00000033088 Gm17078M0QW51 211 aa10.46□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 64 ms