RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 HnrnplQ8R081 586 aaKnown RBP10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Ccdc59Q8R2N0 240 aaKnown RBP10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Mapk8Q91Y86 384 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Trim33Q99PP7 1142 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Kif19Q99PT9 997 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 NarfQ9CYQ7 462 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Vsig1Q9D2J4 407 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 PtsQ9R1Z7 144 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Tp53bp1P70399 1969 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Igkv10-94A0A075B5L1 115 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Btnl6A2CG22 539 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Fam46dB1ATX6 390 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Tex28B1AYN9 409 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Prrt4B2RU40 902 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Sec14l5B2RXM5 696 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Rgs4O08899 205 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Sult2b1O35400 338 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Socs5O54928 536 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gstm1P10649 218 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 BdnfP21237 249 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Hnf1bP27889 558 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Emx2Q04744 253 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Dna2Q6ZQJ5 1062 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 AftphQ80WT5 931 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Timm29Q8BGX2 266 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Ppp1r1cQ8BKK4 108 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Znf689Q8BKK5 500 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Tspan12Q8BKT6 305 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Kctd11Q8K485 232 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Ntmt1Q8R2U4 223 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Olfr1208Q8VG47 308 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 PxnQ8VI36 591 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Clp1Q99LI9 425 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 PpidQ9CR16 370 aaKnown RBP10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Ly6kQ9CWP4 154 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Fbxl20Q9CZV8 436 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Hapln2Q9ESM3 341 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Aldh1a3Q9JHW9 512 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Wdr12Q9JJA4 423 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Slc7a8Q9QXW9 531 aa10.75□□□□□ -0.69
Ldb3-202ENSMUST00000022328 A0A1L1ST33 502 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Smok4aA0JLX3 433 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Itga8A2ARA8 1062 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Pramef25A2ASI9 494 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Rrn3B2RS91 656 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 ClockO08785 855 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Clk4O35493 481 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 P04213 122 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Hoxa9P09631 271 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Ctla2bP12400 113 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gli1P47806 1111 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Polr2iP60898 125 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Cd6Q61003 665 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Pik3r3Q64143 461 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Slc13a5Q67BT3 572 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Tmem270Q6UJB9 264 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Olfr1036Q7TR85 310 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Klhl42Q8BFQ9 493 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Epb41l5Q8BGS1 731 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Rbms3Q8BWL5 431 aaKnown RBP10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Rdh12Q8BYK4 316 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Ftsj1Q8CBC7 324 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Znf668Q8K2R5 619 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Mmgt2Q8R3L0 123 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Lsm1Q8VC85 133 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Ccdc71Q8VEG0 433 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Rbm47Q91WT8 590 aaKnown RBP10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gstt3Q99L20 241 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gimap3Q99MI6 301 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 TrirQ9D735 173 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Katna1Q9WV86 491 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Slc25a14Q9Z2B2 325 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Igkv18-36A0A075B5M9 114 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Olfr566A0A1B0GST0 319 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gm12695A2AGB2 545 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gm13285B1AYI3 182 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gm13275B1AYI8 182 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Phf11bB4XVQ1 276 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gm2237E9Q501 211 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gm3591K7N6X2 186 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Vmn2r8L7N472 848 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gm3488M0QW81 238 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Matn4O89029 624 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 F2P19221 618 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Psme2P97372 239 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gjb5Q02739 271 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Fam189a1Q6A044 515 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Zfp324Q78F42 583 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Zfp418Q8BFS8 652 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Ppp1r15bQ8BFW3 697 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Nod1Q8BHB0 953 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 IfnzQ8BQT1 182 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Neu4Q8BZL1 478 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Sept11Q8C1B7 431 aaKnown RBP10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 4931406P16RikQ8C5X1 1059 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Gm13278Q8CD73 182 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Stk32cQ8QZV4 488 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Olfr1310Q8VF85 312 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Rsph1Q8VIG3 301 aa10.74□□□□□ -0.69
Ldb3-202ENSMUST00000022328 Capn8Q91VA3 703 aa10.74□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms