RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
PHGDH-231ENST00000641939 PTGER2P43116 358 aa20.13■□□□□ 0.81
PHGDH-231ENST00000641939 NFATC2IPQ8NCF5 419 aa20.13■□□□□ 0.81
PHGDH-231ENST00000641939 SLC16A10Q8TF71 515 aa20.13■□□□□ 0.81
PHGDH-231ENST00000641939 UBR3Q6ZT12 1888 aa20.13■□□□□ 0.81
PHGDH-231ENST00000641939 RNMTO43148 476 aaKnown RBP20.12■□□□□ 0.81
PHGDH-231ENST00000641939 ATP6V1AP38606 617 aa20.12■□□□□ 0.81
PHGDH-231ENST00000641939 RSPH6AQ9H0K4 717 aa20.12■□□□□ 0.81
PHGDH-231ENST00000641939 LGR6Q9HBX8 967 aa20.12■□□□□ 0.81
PHGDH-231ENST00000641939 COL24A1Q17RW2 1714 aa20.11■□□□□ 0.81
PHGDH-231ENST00000641939 U2AF1L5P0DN76 240 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-231ENST00000641939 PRKAR2BP31323 418 aa20.11■□□□□ 0.81
PHGDH-231ENST00000641939 U2AF1Q01081 240 aaKnown RBP eCLIP20.11■□□□□ 0.81
PHGDH-231ENST00000641939 GAS2L2Q8NHY3 880 aa20.11■□□□□ 0.81
PHGDH-231ENST00000641939 MRC1P22897 1456 aa20.11■□□□□ 0.81
PHGDH-231ENST00000641939 ITPK1Q13572 414 aa20.1■□□□□ 0.81
PHGDH-231ENST00000641939 RALBP1Q15311 655 aa20.1■□□□□ 0.81
PHGDH-231ENST00000641939 LINC00116Q8NCU8 138 aa20.1■□□□□ 0.81
PHGDH-231ENST00000641939 AK7Q96M32 723 aa20.1■□□□□ 0.81
PHGDH-231ENST00000641939 SGIP1Q9BQI5 828 aa20.1■□□□□ 0.81
PHGDH-231ENST00000641939 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
PHGDH-231ENST00000641939 SLC52A2Q9HAB3 445 aa20.1■□□□□ 0.81
PHGDH-231ENST00000641939 MSH5O43196 834 aa20.09■□□□□ 0.81
PHGDH-231ENST00000641939 COL23A1Q86Y22 540 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-231ENST00000641939 FLAD1Q8NFF5 587 aa20.09■□□□□ 0.81
PHGDH-231ENST00000641939 COL5A3P25940 1745 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-231ENST00000641939 MAP3K5Q99683 1374 aa20.08■□□□□ 0.81
PHGDH-231ENST00000641939 FCHSD2O94868 740 aa20.08■□□□□ 0.81
PHGDH-231ENST00000641939 PHACTR3Q96KR7 559 aa20.08■□□□□ 0.81
PHGDH-231ENST00000641939 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
PHGDH-231ENST00000641939 SLC4A9Q96Q91 983 aa20.07■□□□□ 0.8
PHGDH-231ENST00000641939 PTCD1O75127 700 aaKnown RBP20.06■□□□□ 0.8
PHGDH-231ENST00000641939 SIPA1L3O60292 1781 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-231ENST00000641939 MYH14Q7Z406 1995 aaKnown RBP20.05■□□□□ 0.8
PHGDH-231ENST00000641939 CICQ96RK0 1608 aaPredicted RBP20.05■□□□□ 0.8
PHGDH-231ENST00000641939 SSFA2P28290 1259 aa20.04■□□□□ 0.8
PHGDH-231ENST00000641939 POLD1P28340 1107 aa20.04■□□□□ 0.8
PHGDH-231ENST00000641939 AMIGO3Q86WK7 504 aa20.04■□□□□ 0.8
PHGDH-231ENST00000641939 ARXQ96QS3 562 aa20.04■□□□□ 0.8
PHGDH-231ENST00000641939 TJP1Q07157 1748 aa20.04■□□□□ 0.8
PHGDH-231ENST00000641939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.03■□□□□ 0.8
PHGDH-231ENST00000641939 GNPATO15228 680 aa20.03■□□□□ 0.8
PHGDH-231ENST00000641939 PHF14O94880 888 aa20.03■□□□□ 0.8
PHGDH-231ENST00000641939 IL17REQ8NFR9 667 aa20.03■□□□□ 0.8
PHGDH-231ENST00000641939 MYBBP1AQ9BQG0 1328 aaKnown RBP20.02■□□□□ 0.8
PHGDH-231ENST00000641939 RC3H1Q5TC82 1133 aaKnown RBP20.02■□□□□ 0.8
PHGDH-231ENST00000641939 UBR2Q8IWV8 1755 aa20.02■□□□□ 0.8
PHGDH-231ENST00000641939 TEFQ10587 303 aa20.01■□□□□ 0.79
PHGDH-231ENST00000641939 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
PHGDH-231ENST00000641939 SMIM5Q71RC9 77 aa20.01■□□□□ 0.79
PHGDH-231ENST00000641939 DLG5Q8TDM6 1919 aa20.01■□□□□ 0.79
PHGDH-231ENST00000641939 CNTNAP4Q9C0A0 1308 aa20.01■□□□□ 0.79
PHGDH-231ENST00000641939 CEMIPQ8WUJ3 1361 aa20■□□□□ 0.79
PHGDH-231ENST00000641939 MSL1Q68DK7 614 aa20■□□□□ 0.79
PHGDH-231ENST00000641939 FHDC1Q9C0D6 1143 aaPredicted RBP20■□□□□ 0.79
PHGDH-231ENST00000641939 KCPQ6ZWJ8 1503 aa20■□□□□ 0.79
PHGDH-231ENST00000641939 NEFMP07197 916 aa19.99■□□□□ 0.79
PHGDH-231ENST00000641939 RTCBQ9Y3I0 505 aaKnown RBP19.99■□□□□ 0.79
PHGDH-231ENST00000641939 RTF1Q92541 710 aaKnown RBP19.98■□□□□ 0.79
PHGDH-231ENST00000641939 SYT17Q9BSW7 474 aa19.98■□□□□ 0.79
PHGDH-231ENST00000641939 TRAPPC3LQ5T215 181 aa19.97■□□□□ 0.79
PHGDH-231ENST00000641939 TTC5Q8N0Z6 440 aa19.97■□□□□ 0.79
PHGDH-231ENST00000641939 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
PHGDH-231ENST00000641939 HTATSF1O43719 755 aaKnown RBP19.96■□□□□ 0.79
PHGDH-231ENST00000641939 RPS6KA4O75676 772 aa19.96■□□□□ 0.79
PHGDH-231ENST00000641939 ADRA2BP18089 450 aa19.96■□□□□ 0.79
PHGDH-231ENST00000641939 CRKLP46109 303 aaKnown RBP19.96■□□□□ 0.79
PHGDH-231ENST00000641939 PLEKHF1Q96S99 279 aa19.96■□□□□ 0.79
PHGDH-231ENST00000641939 PRKRIP1Q9H875 184 aaPredicted RBP19.96■□□□□ 0.79
PHGDH-231ENST00000641939 C4AP0C0L4 1744 aa19.96■□□□□ 0.79
PHGDH-231ENST00000641939 UTRNP46939 3433 aa19.95■□□□□ 0.78
PHGDH-231ENST00000641939 DNAJC10Q8IXB1 793 aa19.95■□□□□ 0.78
PHGDH-231ENST00000641939 VSIG10Q8N0Z9 540 aa19.95■□□□□ 0.78
PHGDH-231ENST00000641939 ZNF790Q6PG37 636 aa19.94■□□□□ 0.78
PHGDH-231ENST00000641939 MCM10Q7L590 875 aa19.94■□□□□ 0.78
PHGDH-231ENST00000641939 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
PHGDH-231ENST00000641939 DCAF8L1A6NGE4 600 aa19.93■□□□□ 0.78
PHGDH-231ENST00000641939 BTBD11A6QL63 1104 aa19.93■□□□□ 0.78
PHGDH-231ENST00000641939 KLHL34Q8N239 644 aa19.93■□□□□ 0.78
PHGDH-231ENST00000641939 ARHGEF1Q92888 912 aaKnown RBP19.93■□□□□ 0.78
PHGDH-231ENST00000641939 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
PHGDH-231ENST00000641939 CYP19A1P11511 503 aaPredicted RBP19.92■□□□□ 0.78
PHGDH-231ENST00000641939 INTS5Q6P9B9 1019 aaKnown RBP19.92■□□□□ 0.78
PHGDH-231ENST00000641939 CCDC87Q9NVE4 849 aa19.92■□□□□ 0.78
PHGDH-231ENST00000641939 RFC4P35249 363 aa19.91■□□□□ 0.78
PHGDH-231ENST00000641939 DCTN1Q14203 1278 aa19.91■□□□□ 0.78
PHGDH-231ENST00000641939 NFE2L2Q16236 605 aa19.91■□□□□ 0.78
PHGDH-231ENST00000641939 ZNF496Q96IT1 587 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-231ENST00000641939 HEG1Q9ULI3 1381 aa19.9■□□□□ 0.78
PHGDH-231ENST00000641939 GOLGB1Q14789 3259 aaKnown RBP19.89■□□□□ 0.77
PHGDH-231ENST00000641939 FMNL2Q96PY5 1086 aa19.89■□□□□ 0.77
PHGDH-231ENST00000641939 STARD3NLO95772 234 aa19.88■□□□□ 0.77
PHGDH-231ENST00000641939 TEX13AQ9BXU3 409 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-231ENST00000641939 SOS1Q07889 1333 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-231ENST00000641939 KCNQ3O43525 872 aa19.87■□□□□ 0.77
PHGDH-231ENST00000641939 GYS1P13807 737 aa19.87■□□□□ 0.77
PHGDH-231ENST00000641939 WDR43Q15061 677 aaKnown RBP eCLIP19.87■□□□□ 0.77
PHGDH-231ENST00000641939 NLGN1Q8N2Q7 840 aa19.87■□□□□ 0.77
PHGDH-231ENST00000641939 TAF7Q15545 349 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-231ENST00000641939 ZBTB1Q9Y2K1 713 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms