RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 LARGE2Q8N3Y3 721 aa10.29□□□□□ -0.76
CASC19-261ENST00000641853 GRIP2Q9C0E4 1043 aa10.29□□□□□ -0.76
CASC19-261ENST00000641853 ZNF358Q9NW07 568 aa10.29□□□□□ -0.76
CASC19-261ENST00000641853 SERTAD1Q9UHV2 236 aa10.29□□□□□ -0.76
CASC19-261ENST00000641853 SIX5Q8N196 739 aa10.29□□□□□ -0.76
CASC19-261ENST00000641853 GPC1P35052 558 aa10.28□□□□□ -0.76
CASC19-261ENST00000641853 FAM196BA6NMK8 535 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L15C9J2P7 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L10C9JJH3 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L13C9JLJ4 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L12C9JPN9 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L11C9JVI0 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L21D6R901 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L18D6R9N7 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L22D6RA61 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L17D6RBQ6 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L19D6RCP7 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L20D6RJB6 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 USP17L24Q0WX57 530 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 PRICKLE2Q7Z3G6 844 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 ARID3AQ99856 593 aa10.27□□□□□ -0.77
CASC19-261ENST00000641853 SFI1A8K8P3 1242 aa10.26□□□□□ -0.77
CASC19-261ENST00000641853 LARP1Q6PKG0 1096 aaKnown RBP10.26□□□□□ -0.77
CASC19-261ENST00000641853 SLC4A9Q96Q91 983 aa10.26□□□□□ -0.77
CASC19-261ENST00000641853 TLR1Q15399 786 aa10.25□□□□□ -0.77
CASC19-261ENST00000641853 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.25□□□□□ -0.77
CASC19-261ENST00000641853 SLC27A3Q5K4L6 730 aa10.25□□□□□ -0.77
CASC19-261ENST00000641853 ARXQ96QS3 562 aa10.25□□□□□ -0.77
CASC19-261ENST00000641853 USP3Q9Y6I4 520 aa10.25□□□□□ -0.77
CASC19-261ENST00000641853 SMTNP53814 917 aa10.25□□□□□ -0.77
CASC19-261ENST00000641853 DPYDQ12882 1025 aa10.25□□□□□ -0.77
CASC19-261ENST00000641853 LYSMD3Q7Z3D4 306 aa10.25□□□□□ -0.77
CASC19-261ENST00000641853 PBXIP1Q96AQ6 731 aa10.25□□□□□ -0.77
CASC19-261ENST00000641853 RHOQP17081 205 aa10.24□□□□□ -0.77
CASC19-261ENST00000641853 EPHA4P54764 986 aa10.24□□□□□ -0.77
CASC19-261ENST00000641853 ANKMY2Q8IV38 441 aa10.24□□□□□ -0.77
CASC19-261ENST00000641853 POU4F2Q12837 409 aa10.23□□□□□ -0.77
CASC19-261ENST00000641853 MTFR1Q15390 333 aa10.23□□□□□ -0.77
CASC19-261ENST00000641853 TNS4Q8IZW8 715 aa10.23□□□□□ -0.77
CASC19-261ENST00000641853 ZSCAN10Q96SZ4 725 aaPredicted RBP10.23□□□□□ -0.77
CASC19-261ENST00000641853 ZMIZ1Q9ULJ6 1067 aa10.23□□□□□ -0.77
CASC19-261ENST00000641853 SENP3-EIF4A1A0A087X0R7 540 aa10.22□□□□□ -0.77
CASC19-261ENST00000641853 A6NJY4 79 aa10.22□□□□□ -0.77
CASC19-261ENST00000641853 PTSQ03393 145 aa10.22□□□□□ -0.77
CASC19-261ENST00000641853 ZNF295-AS1Q8N0V1 137 aa10.22□□□□□ -0.77
CASC19-261ENST00000641853 TSEN2Q8NCE0 465 aaKnown RBP10.22□□□□□ -0.77
CASC19-261ENST00000641853 IQSEC3Q9UPP2 1182 aaPredicted RBP10.22□□□□□ -0.77
CASC19-261ENST00000641853 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
CASC19-261ENST00000641853 SPATA31C2B4DYI2 1134 aa10.21□□□□□ -0.78
CASC19-261ENST00000641853 BACH1O14867 736 aa10.21□□□□□ -0.78
CASC19-261ENST00000641853 SEC13P55735 322 aa10.21□□□□□ -0.78
CASC19-261ENST00000641853 NBPF10Q6P3W6 841 aaKnown RBP10.21□□□□□ -0.78
CASC19-261ENST00000641853 NBPF15Q8N660 670 aa10.21□□□□□ -0.78
CASC19-261ENST00000641853 NOVA2Q9UNW9 492 aaKnown RBP10.21□□□□□ -0.78
CASC19-261ENST00000641853 ATG7O95352 703 aa10.2□□□□□ -0.78
CASC19-261ENST00000641853 FOXK2Q01167 660 aa10.2□□□□□ -0.78
CASC19-261ENST00000641853 TMEM214Q6NUQ4 689 aaKnown RBP10.2□□□□□ -0.78
CASC19-261ENST00000641853 SCHIP1Q9P0W5 487 aaPredicted RBP10.2□□□□□ -0.78
CASC19-261ENST00000641853 M0R2N6 131 aa10.19□□□□□ -0.78
CASC19-261ENST00000641853 LGR5O75473 907 aa10.19□□□□□ -0.78
CASC19-261ENST00000641853 C4orf17Q53FE4 359 aa10.19□□□□□ -0.78
CASC19-261ENST00000641853 TBCELQ5QJ74 424 aa10.19□□□□□ -0.78
CASC19-261ENST00000641853 STK32AQ8WU08 396 aa10.19□□□□□ -0.78
CASC19-261ENST00000641853 SLC35F4A4IF30 521 aa10.18□□□□□ -0.78
CASC19-261ENST00000641853 CDK2AP1O14519 115 aa10.18□□□□□ -0.78
CASC19-261ENST00000641853 PHKA2P46019 1235 aa10.18□□□□□ -0.78
CASC19-261ENST00000641853 VEGFBP49765 207 aa10.18□□□□□ -0.78
CASC19-261ENST00000641853 ELOAQ14241 798 aaKnown RBP10.18□□□□□ -0.78
CASC19-261ENST00000641853 TAS1R3Q7RTX0 852 aa10.18□□□□□ -0.78
CASC19-261ENST00000641853 RHBDD1Q8TEB9 315 aa10.18□□□□□ -0.78
CASC19-261ENST00000641853 FAM200AQ8TCP9 573 aa10.17□□□□□ -0.78
CASC19-261ENST00000641853 ZNF775Q96BV0 537 aaPredicted RBP10.17□□□□□ -0.78
CASC19-261ENST00000641853 TSPAN10Q9H1Z9 355 aaPredicted RBP10.17□□□□□ -0.78
CASC19-261ENST00000641853 RBM19Q9Y4C8 960 aaKnown RBP10.17□□□□□ -0.78
CASC19-261ENST00000641853 FAM69CQ0P6D2 419 aa10.16□□□□□ -0.78
CASC19-261ENST00000641853 GNASQ5JWF2 1037 aa10.16□□□□□ -0.78
CASC19-261ENST00000641853 SLC9A9Q8IVB4 645 aa10.16□□□□□ -0.78
CASC19-261ENST00000641853 CCDC155Q8N6L0 562 aa10.16□□□□□ -0.78
CASC19-261ENST00000641853 NXF1Q9UBU9 619 aaKnown RBP10.16□□□□□ -0.78
CASC19-261ENST00000641853 C21orf2O43822 256 aa10.15□□□□□ -0.78
CASC19-261ENST00000641853 PPFIA3O75145 1194 aa10.15□□□□□ -0.78
CASC19-261ENST00000641853 PPP1R15AO75807 674 aaPredicted RBP10.15□□□□□ -0.78
CASC19-261ENST00000641853 WDR44Q5JSH3 913 aa10.15□□□□□ -0.78
CASC19-261ENST00000641853 TMEM164Q5U3C3 297 aa10.15□□□□□ -0.78
CASC19-261ENST00000641853 GAS2L2Q8NHY3 880 aa10.15□□□□□ -0.78
CASC19-261ENST00000641853 ZDHHC1Q8WTX9 485 aa10.15□□□□□ -0.79
CASC19-261ENST00000641853 HINFPQ9BQA5 517 aa10.14□□□□□ -0.79
CASC19-261ENST00000641853 NIFKQ9BYG3 293 aaKnown RBP10.14□□□□□ -0.79
CASC19-261ENST00000641853 TIMMDC1Q9NPL8 285 aa10.14□□□□□ -0.79
CASC19-261ENST00000641853 PARP3Q9Y6F1 533 aa10.14□□□□□ -0.79
CASC19-261ENST00000641853 TERTO14746 1132 aaKnown RBP10.13□□□□□ -0.79
CASC19-261ENST00000641853 GTF2E1P29083 439 aaPredicted RBP10.13□□□□□ -0.79
CASC19-261ENST00000641853 PLA2G4AP47712 749 aa10.13□□□□□ -0.79
CASC19-261ENST00000641853 SH3PXD2AQ5TCZ1 1133 aa10.13□□□□□ -0.79
CASC19-261ENST00000641853 CUEDC1Q9NWM3 386 aaPredicted RBP10.13□□□□□ -0.79
CASC19-261ENST00000641853 LCE2CQ5TA81 110 aa10.12□□□□□ -0.79
CASC19-261ENST00000641853 CABP1Q9NZU7 370 aa10.12□□□□□ -0.79
CASC19-261ENST00000641853 DYRK1BQ9Y463 629 aa10.12□□□□□ -0.79
CASC19-261ENST00000641853 NFX1Q12986 1120 aaKnown RBP10.11□□□□□ -0.79
CASC19-261ENST00000641853 ACIN1Q9UKV3 1341 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms