RNA–Protein interactions for RNA: ENST00000641713.1

CCDC196-210, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,464 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-210ENST00000641713 USP47Q96K76 1375 aa9.56□□□□□ -0.88
CCDC196-210ENST00000641713 FBLN1P23142 703 aa9.56□□□□□ -0.88
CCDC196-210ENST00000641713 HOXC9P31274 260 aa9.56□□□□□ -0.88
CCDC196-210ENST00000641713 AMPHP49418 695 aa9.56□□□□□ -0.88
CCDC196-210ENST00000641713 DDX54Q8TDD1 881 aaKnown RBP9.56□□□□□ -0.88
CCDC196-210ENST00000641713 TTLL13PA6NNM8 815 aa9.55□□□□□ -0.88
CCDC196-210ENST00000641713 TMF1P82094 1093 aa9.55□□□□□ -0.88
CCDC196-210ENST00000641713 KIF20BQ96Q89 1820 aa9.55□□□□□ -0.88
CCDC196-210ENST00000641713 DOT1LQ8TEK3 1739 aa9.55□□□□□ -0.88
CCDC196-210ENST00000641713 SHANK3Q9BYB0 1731 aa9.55□□□□□ -0.88
CCDC196-210ENST00000641713 YY1P25490 414 aa9.54□□□□□ -0.88
CCDC196-210ENST00000641713 PTGER2P43116 358 aa9.54□□□□□ -0.88
CCDC196-210ENST00000641713 RRS1Q15050 365 aaKnown RBP9.54□□□□□ -0.88
CCDC196-210ENST00000641713 E2F4Q16254 413 aa9.54□□□□□ -0.88
CCDC196-210ENST00000641713 RTL1A6NKG5 1358 aa9.54□□□□□ -0.88
CCDC196-210ENST00000641713 FYB1O15117 783 aa9.53□□□□□ -0.88
CCDC196-210ENST00000641713 PDE4AP27815 886 aa9.53□□□□□ -0.88
CCDC196-210ENST00000641713 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
CCDC196-210ENST00000641713 MTFR1LQ9H019 292 aa9.53□□□□□ -0.88
CCDC196-210ENST00000641713 GGNBP2Q9H3C7 697 aa9.53□□□□□ -0.88
CCDC196-210ENST00000641713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCDC196-210ENST00000641713 MEGF6O75095 1541 aa9.53□□□□□ -0.88
CCDC196-210ENST00000641713 SYTL4Q96C24 671 aaPredicted RBP9.53□□□□□ -0.88
CCDC196-210ENST00000641713 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
CCDC196-210ENST00000641713 LRRC4BQ9NT99 713 aa9.53□□□□□ -0.88
CCDC196-210ENST00000641713 SMG6Q86US8 1419 aaKnown RBP9.52□□□□□ -0.89
CCDC196-210ENST00000641713 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
CCDC196-210ENST00000641713 PRIM1P49642 420 aaKnown RBP9.52□□□□□ -0.89
CCDC196-210ENST00000641713 ZNF827Q17R98 1081 aa9.52□□□□□ -0.89
CCDC196-210ENST00000641713 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
CCDC196-210ENST00000641713 ZCRB1Q8TBF4 217 aaKnown RBP9.52□□□□□ -0.89
CCDC196-210ENST00000641713 LY75O60449 1722 aa9.51□□□□□ -0.89
CCDC196-210ENST00000641713 QSER1Q2KHR3 1735 aa9.51□□□□□ -0.89
CCDC196-210ENST00000641713 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
CCDC196-210ENST00000641713 NBPF6Q5VWK0 638 aa9.51□□□□□ -0.89
CCDC196-210ENST00000641713 USHBP1Q8N6Y0 703 aa9.51□□□□□ -0.89
CCDC196-210ENST00000641713 NBPF4Q96M43 638 aa9.51□□□□□ -0.89
CCDC196-210ENST00000641713 FHDC1Q9C0D6 1143 aaPredicted RBP9.51□□□□□ -0.89
CCDC196-210ENST00000641713 DAXXQ9UER7 740 aaPredicted RBP9.51□□□□□ -0.89
CCDC196-210ENST00000641713 TRIM35Q9UPQ4 493 aa9.51□□□□□ -0.89
CCDC196-210ENST00000641713 TUBGCP6Q96RT7 1819 aa9.51□□□□□ -0.89
CCDC196-210ENST00000641713 KCNQ4P56696 695 aa9.5□□□□□ -0.89
CCDC196-210ENST00000641713 SP7Q8TDD2 431 aaPredicted RBP9.5□□□□□ -0.89
CCDC196-210ENST00000641713 RAPGEF4Q8WZA2 1011 aa9.5□□□□□ -0.89
CCDC196-210ENST00000641713 SYT17Q9BSW7 474 aa9.5□□□□□ -0.89
CCDC196-210ENST00000641713 NSD2O96028 1365 aa9.5□□□□□ -0.89
CCDC196-210ENST00000641713 FLT4P35916 1363 aa9.5□□□□□ -0.89
CCDC196-210ENST00000641713 TULP1O00294 542 aaPredicted RBP9.49□□□□□ -0.89
CCDC196-210ENST00000641713 CLCN6P51797 869 aa9.49□□□□□ -0.89
CCDC196-210ENST00000641713 HSP90AB2PQ58FF8 381 aa9.49□□□□□ -0.89
CCDC196-210ENST00000641713 ARHGEF1Q92888 912 aaKnown RBP9.49□□□□□ -0.89
CCDC196-210ENST00000641713 ARXQ96QS3 562 aa9.49□□□□□ -0.89
CCDC196-210ENST00000641713 CGNL1Q0VF96 1302 aa9.49□□□□□ -0.89
CCDC196-210ENST00000641713 INSRP06213 1382 aa9.49□□□□□ -0.89
CCDC196-210ENST00000641713 NSD3Q9BZ95 1437 aa9.49□□□□□ -0.89
CCDC196-210ENST00000641713 CARD14Q9BXL6 1004 aa9.48□□□□□ -0.89
CCDC196-210ENST00000641713 TFCP2L1Q9NZI6 479 aa9.48□□□□□ -0.89
CCDC196-210ENST00000641713 KIF24Q5T7B8 1368 aa9.48□□□□□ -0.89
CCDC196-210ENST00000641713 ANKRD26Q9UPS8 1709 aa9.48□□□□□ -0.89
CCDC196-210ENST00000641713 PNPLA7Q6ZV29 1317 aa9.47□□□□□ -0.89
CCDC196-210ENST00000641713 TATP17735 454 aaPredicted RBP9.47□□□□□ -0.89
CCDC196-210ENST00000641713 SLC16A10Q8TF71 515 aa9.47□□□□□ -0.89
CCDC196-210ENST00000641713 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
CCDC196-210ENST00000641713 CHD4Q14839 1912 aa9.47□□□□□ -0.89
CCDC196-210ENST00000641713 COL24A1Q17RW2 1714 aa9.47□□□□□ -0.89
CCDC196-210ENST00000641713 PCDH11XQ9BZA7 1347 aa9.47□□□□□ -0.89
CCDC196-210ENST00000641713 PCDH11YQ9BZA8 1340 aa9.47□□□□□ -0.89
CCDC196-210ENST00000641713 CCNL1Q9UK58 526 aaPredicted RBP9.47□□□□□ -0.89
CCDC196-210ENST00000641713 TIMELESSQ9UNS1 1208 aa9.47□□□□□ -0.89
CCDC196-210ENST00000641713 EMILIN1Q9Y6C2 1016 aa9.47□□□□□ -0.89
CCDC196-210ENST00000641713 MAP2P11137 1827 aaKnown RBP9.46□□□□□ -0.89
CCDC196-210ENST00000641713 MAP3K5Q99683 1374 aa9.46□□□□□ -0.9
CCDC196-210ENST00000641713 CLSPNQ9HAW4 1339 aa9.46□□□□□ -0.9
CCDC196-210ENST00000641713 PPM1GO15355 546 aaPredicted RBP9.46□□□□□ -0.9
CCDC196-210ENST00000641713 EVX2Q03828 476 aa9.46□□□□□ -0.9
CCDC196-210ENST00000641713 PCGF6Q9BYE7 350 aa9.46□□□□□ -0.9
CCDC196-210ENST00000641713 CRISPLD2Q9H0B8 497 aa9.46□□□□□ -0.9
CCDC196-210ENST00000641713 PKD1L3Q7Z443 1732 aa9.46□□□□□ -0.9
CCDC196-210ENST00000641713 C5P01031 1676 aa9.46□□□□□ -0.9
CCDC196-210ENST00000641713 ITGB4P16144 1822 aa9.45□□□□□ -0.9
CCDC196-210ENST00000641713 TOGARAM1Q9Y4F4 1720 aa9.45□□□□□ -0.9
CCDC196-210ENST00000641713 POLD1P28340 1107 aa9.45□□□□□ -0.9
CCDC196-210ENST00000641713 TAF1LQ8IZX4 1826 aa9.45□□□□□ -0.9
CCDC196-210ENST00000641713 CYP27B1O15528 508 aa9.44□□□□□ -0.9
CCDC196-210ENST00000641713 MFSD10Q14728 455 aa9.44□□□□□ -0.9
CCDC196-210ENST00000641713 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
CCDC196-210ENST00000641713 POLR3GLQ9BT43 218 aa9.44□□□□□ -0.9
CCDC196-210ENST00000641713 NCAPD2Q15021 1401 aa9.44□□□□□ -0.9
CCDC196-210ENST00000641713 PALLDQ8WX93 1383 aa9.43□□□□□ -0.9
CCDC196-210ENST00000641713 MPRIPQ6WCQ1 1025 aa9.43□□□□□ -0.9
CCDC196-210ENST00000641713 GPR162Q16538 588 aa9.42□□□□□ -0.9
CCDC196-210ENST00000641713 COL23A1Q86Y22 540 aaPredicted RBP9.42□□□□□ -0.9
CCDC196-210ENST00000641713 ZNF784Q8NCA9 323 aaPredicted RBP9.42□□□□□ -0.9
CCDC196-210ENST00000641713 WASHC2AQ641Q2 1341 aa9.42□□□□□ -0.9
CCDC196-210ENST00000641713 UTRNP46939 3433 aa9.42□□□□□ -0.9
CCDC196-210ENST00000641713 TNNT2P45379 298 aaPredicted RBP9.41□□□□□ -0.9
CCDC196-210ENST00000641713 ATN1P54259 1190 aaPredicted RBP9.41□□□□□ -0.9
CCDC196-210ENST00000641713 DPY19L2Q6NUT2 758 aa9.41□□□□□ -0.9
CCDC196-210ENST00000641713 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCDC196-210ENST00000641713 EYA1Q99502 592 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms