RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 RBM27Q9P2N5 1060 aaKnown RBP14.54□□□□□ -0.08
RBFOX1-224ENST00000641259 CHAF1AQ13111 956 aaPredicted RBP14.54□□□□□ -0.08
RBFOX1-224ENST00000641259 PRPF40AO75400 957 aaKnown RBP14.53□□□□□ -0.08
RBFOX1-224ENST00000641259 ARHGEF10O15013 1369 aa14.53□□□□□ -0.08
RBFOX1-224ENST00000641259 C17orf53Q8N3J3 647 aaPredicted RBP14.53□□□□□ -0.08
RBFOX1-224ENST00000641259 ZBTB9Q96C00 473 aa14.53□□□□□ -0.08
RBFOX1-224ENST00000641259 RGPD2P0DJD1 1756 aa14.53□□□□□ -0.08
RBFOX1-224ENST00000641259 SKOR2Q2VWA4 1001 aaPredicted RBP14.53□□□□□ -0.08
RBFOX1-224ENST00000641259 RWDD1Q9H446 243 aaPredicted RBP14.53□□□□□ -0.08
RBFOX1-224ENST00000641259 IGSF1Q8N6C5 1336 aa14.53□□□□□ -0.08
RBFOX1-224ENST00000641259 KDM2BQ8NHM5 1336 aa14.53□□□□□ -0.08
RBFOX1-224ENST00000641259 LTV1Q96GA3 475 aaPredicted RBP14.52□□□□□ -0.08
RBFOX1-224ENST00000641259 TBC1D32Q96NH3 1257 aa14.52□□□□□ -0.08
RBFOX1-224ENST00000641259 KDRP35968 1356 aa14.52□□□□□ -0.08
RBFOX1-224ENST00000641259 KIF1AQ12756 1690 aa14.52□□□□□ -0.09
RBFOX1-224ENST00000641259 MTERF4Q7Z6M4 381 aaKnown RBP14.52□□□□□ -0.09
RBFOX1-224ENST00000641259 MCM10Q7L590 875 aa14.52□□□□□ -0.09
RBFOX1-224ENST00000641259 ITPRIPQ8IWB1 547 aa14.52□□□□□ -0.09
RBFOX1-224ENST00000641259 TSPYL6Q8N831 410 aa14.52□□□□□ -0.09
RBFOX1-224ENST00000641259 CSPP1Q1MSJ5 1256 aa14.51□□□□□ -0.09
RBFOX1-224ENST00000641259 USHBP1Q8N6Y0 703 aa14.51□□□□□ -0.09
RBFOX1-224ENST00000641259 SSH1Q8WYL5 1049 aa14.51□□□□□ -0.09
RBFOX1-224ENST00000641259 LNPKQ9C0E8 428 aa14.51□□□□□ -0.09
RBFOX1-224ENST00000641259 MBIPQ9NS73 344 aa14.51□□□□□ -0.09
RBFOX1-224ENST00000641259 ZNF853P0CG23 659 aa14.51□□□□□ -0.09
RBFOX1-224ENST00000641259 ALS2Q96Q42 1657 aa14.51□□□□□ -0.09
RBFOX1-224ENST00000641259 NPHP1O15259 732 aa14.5□□□□□ -0.09
RBFOX1-224ENST00000641259 MTHFSDQ2M296 383 aaKnown RBP14.5□□□□□ -0.09
RBFOX1-224ENST00000641259 ANTXR1Q9H6X2 564 aa14.5□□□□□ -0.09
RBFOX1-224ENST00000641259 SLIT3O75094 1523 aa14.5□□□□□ -0.09
RBFOX1-224ENST00000641259 ZNF335Q9H4Z2 1342 aaPredicted RBP14.5□□□□□ -0.09
RBFOX1-224ENST00000641259 SYCE3A1L190 88 aa14.5□□□□□ -0.09
RBFOX1-224ENST00000641259 KRT28Q7Z3Y7 464 aa14.5□□□□□ -0.09
RBFOX1-224ENST00000641259 CCDC94Q9BW85 323 aaPredicted RBP14.5□□□□□ -0.09
RBFOX1-224ENST00000641259 MED1Q15648 1581 aaPredicted RBP14.49□□□□□ -0.09
RBFOX1-224ENST00000641259 LMOD2Q6P5Q4 547 aa14.49□□□□□ -0.09
RBFOX1-224ENST00000641259 SASS6Q6UVJ0 657 aa14.49□□□□□ -0.09
RBFOX1-224ENST00000641259 PHRF1Q9P1Y6 1649 aaKnown RBP14.49□□□□□ -0.09
RBFOX1-224ENST00000641259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 ZNF592Q92610 1267 aa14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 ZFP91Q96JP5 570 aaPredicted RBP14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 USP19O94966 1318 aa14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 PDCL2Q8N4E4 241 aa14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 ELL2O00472 640 aaPredicted RBP14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 DYNC1I1O14576 645 aa14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 ATF3P18847 181 aa14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 SMC4Q9NTJ3 1288 aa14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 IFT57Q9NWB7 429 aa14.48□□□□□ -0.09
RBFOX1-224ENST00000641259 GCP02774 474 aa14.47□□□□□ -0.09
RBFOX1-224ENST00000641259 PDE3AQ14432 1141 aa14.47□□□□□ -0.09
RBFOX1-224ENST00000641259 DCCP43146 1447 aa14.47□□□□□ -0.09
RBFOX1-224ENST00000641259 KRT24Q2M2I5 525 aa14.47□□□□□ -0.09
RBFOX1-224ENST00000641259 KIF24Q5T7B8 1368 aa14.47□□□□□ -0.09
RBFOX1-224ENST00000641259 C8orf58Q8NAV2 365 aa14.47□□□□□ -0.09
RBFOX1-224ENST00000641259 CHAMP1Q96JM3 812 aa14.47□□□□□ -0.09
RBFOX1-224ENST00000641259 RGPD5Q99666 1765 aa14.47□□□□□ -0.09
RBFOX1-224ENST00000641259 RTL1A6NKG5 1358 aa14.46□□□□□ -0.09
RBFOX1-224ENST00000641259 CRB1P82279 1406 aa14.46□□□□□ -0.09
RBFOX1-224ENST00000641259 IP6K1Q92551 441 aa14.46□□□□□ -0.09
RBFOX1-224ENST00000641259 CFAP44Q96MT7 982 aa14.46□□□□□ -0.09
RBFOX1-224ENST00000641259 U2AF2P26368 475 aaKnown RBP eCLIP14.46□□□□□ -0.1
RBFOX1-224ENST00000641259 NBPF6Q5VWK0 638 aa14.46□□□□□ -0.1
RBFOX1-224ENST00000641259 LRRC59Q96AG4 307 aaKnown RBP14.46□□□□□ -0.1
RBFOX1-224ENST00000641259 NBPF4Q96M43 638 aa14.46□□□□□ -0.1
RBFOX1-224ENST00000641259 NOB1Q9ULX3 412 aaKnown RBP14.46□□□□□ -0.1
RBFOX1-224ENST00000641259 AXIN2Q9Y2T1 843 aa14.46□□□□□ -0.1
RBFOX1-224ENST00000641259 TRIM27P14373 513 aa14.45□□□□□ -0.1
RBFOX1-224ENST00000641259 DMTNQ08495 405 aa14.45□□□□□ -0.1
RBFOX1-224ENST00000641259 TAF7LQ5H9L4 462 aa14.45□□□□□ -0.1
RBFOX1-224ENST00000641259 VAMP4O75379 141 aa14.45□□□□□ -0.1
RBFOX1-224ENST00000641259 MIS18AQ9NYP9 233 aa14.45□□□□□ -0.1
RBFOX1-224ENST00000641259 CT47B1P0C2W7 299 aaPredicted RBP14.45□□□□□ -0.1
RBFOX1-224ENST00000641259 PRIM1P49642 420 aaKnown RBP14.45□□□□□ -0.1
RBFOX1-224ENST00000641259 NCOA3Q9Y6Q9 1424 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 GNAI1P63096 354 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 DRC7Q8IY82 874 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 ARHGEF25Q86VW2 580 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 SPC24Q8NBT2 197 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 MSH6P52701 1360 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 PXDNQ92626 1479 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 LMOD3Q0VAK6 560 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 CCDC39Q9UFE4 941 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 KIF3AQ9Y496 699 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 LRRC37A3O60309 1634 aa14.44□□□□□ -0.1
RBFOX1-224ENST00000641259 PCDHB15Q9Y5E8 787 aa14.43□□□□□ -0.1
RBFOX1-224ENST00000641259 KCNH5Q8NCM2 988 aa14.43□□□□□ -0.1
RBFOX1-224ENST00000641259 CABLES1Q8TDN4 633 aa14.43□□□□□ -0.1
RBFOX1-224ENST00000641259 RBSNQ9H1K0 784 aa14.43□□□□□ -0.1
RBFOX1-224ENST00000641259 CRYBG1Q9Y4K1 1723 aa14.43□□□□□ -0.1
RBFOX1-224ENST00000641259 TTC12Q9H892 705 aaPredicted RBP14.43□□□□□ -0.1
RBFOX1-224ENST00000641259 ZKSCAN2Q63HK3 967 aa14.42□□□□□ -0.1
RBFOX1-224ENST00000641259 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
RBFOX1-224ENST00000641259 ISY1Q9ULR0 285 aaKnown RBP14.42□□□□□ -0.1
RBFOX1-224ENST00000641259 ZC3H6P61129 1189 aaKnown RBP14.41□□□□□ -0.1
RBFOX1-224ENST00000641259 CHL1O00533 1208 aa14.41□□□□□ -0.1
RBFOX1-224ENST00000641259 TWISTNBQ3B726 338 aaPredicted RBP14.41□□□□□ -0.1
RBFOX1-224ENST00000641259 ZKSCAN5Q9Y2L8 839 aa14.41□□□□□ -0.1
RBFOX1-224ENST00000641259 CHMP3Q9Y3E7 222 aa14.41□□□□□ -0.1
RBFOX1-224ENST00000641259 ATF7IPQ6VMQ6 1270 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms