RNA–Protein interactions for RNA: ENST00000640946.1

PRICKLE1-221, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 2

Gene PRICKLE1, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-221ENST00000640946 PRIM1P49642 420 aaKnown RBP10.62□□□□□ -0.71
PRICKLE1-221ENST00000640946 PLEKHO1Q53GL0 409 aaPredicted RBP10.62□□□□□ -0.71
PRICKLE1-221ENST00000640946 SPG7Q9UQ90 795 aa10.62□□□□□ -0.71
PRICKLE1-221ENST00000640946 PCDH11XQ9BZA7 1347 aa10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 PCDH11YQ9BZA8 1340 aa10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 KAT6BQ8WYB5 2073 aa10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 C5P01031 1676 aa10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 U2SURPO15042 1029 aaKnown RBP10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 HMOX1P09601 288 aa10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 U2AF1L5P0DN76 240 aaPredicted RBP10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 U2AF1Q01081 240 aaKnown RBP eCLIP10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 DDX54Q8TDD1 881 aaKnown RBP10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 PLEKHF1Q96S99 279 aa10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 TAF1LQ8IZX4 1826 aa10.61□□□□□ -0.71
PRICKLE1-221ENST00000640946 GRIN3BO60391 1043 aa10.6□□□□□ -0.71
PRICKLE1-221ENST00000640946 PHKG2P15735 406 aa10.6□□□□□ -0.71
PRICKLE1-221ENST00000640946 CCDC184Q52MB2 194 aa10.6□□□□□ -0.71
PRICKLE1-221ENST00000640946 MSL1Q68DK7 614 aa10.6□□□□□ -0.71
PRICKLE1-221ENST00000640946 IFNL2Q8IZJ0 200 aa10.6□□□□□ -0.71
PRICKLE1-221ENST00000640946 HSPA6P17066 643 aa10.59□□□□□ -0.71
PRICKLE1-221ENST00000640946 DIEXFQ68CQ4 756 aaKnown RBP10.59□□□□□ -0.71
PRICKLE1-221ENST00000640946 AMIGO3Q86WK7 504 aa10.59□□□□□ -0.71
PRICKLE1-221ENST00000640946 PNISRQ8TF01 805 aaKnown RBP10.59□□□□□ -0.71
PRICKLE1-221ENST00000640946 PHACTR3Q96KR7 559 aa10.59□□□□□ -0.71
PRICKLE1-221ENST00000640946 PNNQ9H307 717 aaKnown RBP10.59□□□□□ -0.71
PRICKLE1-221ENST00000640946 HSP90AB1P08238 724 aaKnown RBP10.58□□□□□ -0.72
PRICKLE1-221ENST00000640946 PRKAR2BP31323 418 aa10.58□□□□□ -0.72
PRICKLE1-221ENST00000640946 MTHFSDQ2M296 383 aaKnown RBP10.58□□□□□ -0.72
PRICKLE1-221ENST00000640946 SYTL4Q96C24 671 aaPredicted RBP10.58□□□□□ -0.72
PRICKLE1-221ENST00000640946 CCNL1Q9UK58 526 aaPredicted RBP10.58□□□□□ -0.72
PRICKLE1-221ENST00000640946 CCER2I3L3R5 266 aa10.57□□□□□ -0.72
PRICKLE1-221ENST00000640946 AKAP4Q5JQC9 854 aa10.57□□□□□ -0.72
PRICKLE1-221ENST00000640946 GAS2L2Q8NHY3 880 aa10.57□□□□□ -0.72
PRICKLE1-221ENST00000640946 ZNF526Q8TF50 670 aaPredicted RBP10.57□□□□□ -0.72
PRICKLE1-221ENST00000640946 DCAF5Q96JK2 942 aa10.57□□□□□ -0.72
PRICKLE1-221ENST00000640946 GPBP1L1Q9HC44 474 aaPredicted RBP10.57□□□□□ -0.72
PRICKLE1-221ENST00000640946 ADAMTS8Q9UP79 889 aa10.57□□□□□ -0.72
PRICKLE1-221ENST00000640946 CD2APQ9Y5K6 639 aa10.57□□□□□ -0.72
PRICKLE1-221ENST00000640946 ADAMTS7Q9UKP4 1686 aa10.57□□□□□ -0.72
PRICKLE1-221ENST00000640946 KIAA1551Q9HCM1 1747 aa10.56□□□□□ -0.72
PRICKLE1-221ENST00000640946 CICQ96RK0 1608 aaPredicted RBP10.56□□□□□ -0.72
PRICKLE1-221ENST00000640946 ERVV-2B6SEH9 535 aa10.56□□□□□ -0.72
PRICKLE1-221ENST00000640946 KIF3CO14782 793 aa10.56□□□□□ -0.72
PRICKLE1-221ENST00000640946 ZNF530Q6P9A1 599 aaPredicted RBP10.56□□□□□ -0.72
PRICKLE1-221ENST00000640946 C4BP0C0L5 1744 aa10.55□□□□□ -0.72
PRICKLE1-221ENST00000640946 UBR3Q6ZT12 1888 aa10.55□□□□□ -0.72
PRICKLE1-221ENST00000640946 HTATSF1O43719 755 aaKnown RBP10.55□□□□□ -0.72
PRICKLE1-221ENST00000640946 WDR43Q15061 677 aaKnown RBP eCLIP10.55□□□□□ -0.72
PRICKLE1-221ENST00000640946 SMIM5Q71RC9 77 aa10.55□□□□□ -0.72
PRICKLE1-221ENST00000640946 MRS2Q9HD23 443 aa10.55□□□□□ -0.72
PRICKLE1-221ENST00000640946 KDM6AO15550 1401 aaPredicted RBP10.54□□□□□ -0.72
PRICKLE1-221ENST00000640946 MSH5O43196 834 aa10.54□□□□□ -0.72
PRICKLE1-221ENST00000640946 C1orf141Q5JVX7 400 aa10.54□□□□□ -0.72
PRICKLE1-221ENST00000640946 DNAJC5GQ8N7S2 189 aa10.54□□□□□ -0.72
PRICKLE1-221ENST00000640946 RUNDC1Q96C34 613 aa10.54□□□□□ -0.72
PRICKLE1-221ENST00000640946 CEMIPQ8WUJ3 1361 aa10.53□□□□□ -0.72
PRICKLE1-221ENST00000640946 SCN11AQ9UI33 1791 aa10.53□□□□□ -0.72
PRICKLE1-221ENST00000640946 GNAT3A8MTJ3 354 aa10.53□□□□□ -0.72
PRICKLE1-221ENST00000640946 IL17REQ8NFR9 667 aa10.53□□□□□ -0.72
PRICKLE1-221ENST00000640946 WWC3Q9ULE0 1092 aa10.53□□□□□ -0.72
PRICKLE1-221ENST00000640946 ITGB4P16144 1822 aa10.53□□□□□ -0.72
PRICKLE1-221ENST00000640946 RNMTO43148 476 aaKnown RBP10.52□□□□□ -0.73
PRICKLE1-221ENST00000640946 NEFMP07197 916 aa10.52□□□□□ -0.73
PRICKLE1-221ENST00000640946 NFE2L2Q16236 605 aa10.52□□□□□ -0.73
PRICKLE1-221ENST00000640946 MPRIPQ6WCQ1 1025 aa10.52□□□□□ -0.73
PRICKLE1-221ENST00000640946 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
PRICKLE1-221ENST00000640946 MRC1P22897 1456 aa10.52□□□□□ -0.73
PRICKLE1-221ENST00000640946 TMPOP42166 694 aaKnown RBP10.51□□□□□ -0.73
PRICKLE1-221ENST00000640946 MIER1Q8N108 512 aa10.51□□□□□ -0.73
PRICKLE1-221ENST00000640946 PIGBQ92521 554 aa10.51□□□□□ -0.73
PRICKLE1-221ENST00000640946 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
PRICKLE1-221ENST00000640946 PALLDQ8WX93 1383 aa10.51□□□□□ -0.73
PRICKLE1-221ENST00000640946 SLC52A2Q9HAB3 445 aa10.5□□□□□ -0.73
PRICKLE1-221ENST00000640946 MAPK8IP3Q9UPT6 1336 aa10.5□□□□□ -0.73
PRICKLE1-221ENST00000640946 DLG5Q8TDM6 1919 aa10.5□□□□□ -0.73
PRICKLE1-221ENST00000640946 VIRMAQ69YN4 1812 aaKnown RBP10.49□□□□□ -0.73
PRICKLE1-221ENST00000640946 PCNTO95613 3336 aa10.49□□□□□ -0.73
PRICKLE1-221ENST00000640946 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
PRICKLE1-221ENST00000640946 CABP4P57796 275 aa10.49□□□□□ -0.73
PRICKLE1-221ENST00000640946 NFATC2IPQ8NCF5 419 aa10.49□□□□□ -0.73
PRICKLE1-221ENST00000640946 TMOD3Q9NYL9 352 aa10.49□□□□□ -0.73
PRICKLE1-221ENST00000640946 WDR90Q96KV7 1748 aa10.49□□□□□ -0.73
PRICKLE1-221ENST00000640946 N4BP2Q86UW6 1770 aaPredicted RBP10.49□□□□□ -0.73
PRICKLE1-221ENST00000640946 PXDNLA1KZ92 1463 aa10.49□□□□□ -0.73
PRICKLE1-221ENST00000640946 SIPA1L3O60292 1781 aaPredicted RBP10.48□□□□□ -0.73
PRICKLE1-221ENST00000640946 RIPK4P57078 832 aa10.48□□□□□ -0.73
PRICKLE1-221ENST00000640946 CCDC27Q2M243 656 aa10.48□□□□□ -0.73
PRICKLE1-221ENST00000640946 CCDC146Q8IYE0 955 aa10.48□□□□□ -0.73
PRICKLE1-221ENST00000640946 NGEFQ8N5V2 710 aa10.48□□□□□ -0.73
PRICKLE1-221ENST00000640946 RTF1Q92541 710 aaKnown RBP10.48□□□□□ -0.73
PRICKLE1-221ENST00000640946 SMARCC1Q92922 1105 aaPredicted RBP10.48□□□□□ -0.73
PRICKLE1-221ENST00000640946 ATG3Q9NT62 314 aa10.48□□□□□ -0.73
PRICKLE1-221ENST00000640946 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
PRICKLE1-221ENST00000640946 BRCA1P38398 1863 aaKnown RBP10.47□□□□□ -0.73
PRICKLE1-221ENST00000640946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.47□□□□□ -0.73
PRICKLE1-221ENST00000640946 APAF1O14727 1248 aa10.47□□□□□ -0.73
PRICKLE1-221ENST00000640946 LMOD3Q0VAK6 560 aa10.47□□□□□ -0.73
PRICKLE1-221ENST00000640946 LINC00116Q8NCU8 138 aa10.47□□□□□ -0.73
PRICKLE1-221ENST00000640946 FLAD1Q8NFF5 587 aa10.47□□□□□ -0.73
PRICKLE1-221ENST00000640946 ZNF831Q5JPB2 1677 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms