RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 SLMAPQ14BN4 828 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 CNKSR2Q8WXI2 1034 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 RNF123Q5XPI4 1314 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 NBPF6Q5VWK0 638 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 NBPF5PQ86XG9 351 aaPredicted RBP9.65□□□□□ -0.86
NECAP1-227ENST00000640648 NBPF4Q96M43 638 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 RPRD2Q5VT52 1461 aaKnown RBP9.64□□□□□ -0.87
NECAP1-227ENST00000640648 ERLIN2O94905 339 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 RARSP54136 660 aaKnown RBP9.64□□□□□ -0.87
NECAP1-227ENST00000640648 C1orf141Q5JVX7 400 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 THUMPD2Q9BTF0 503 aaKnown RBP9.64□□□□□ -0.87
NECAP1-227ENST00000640648 FIBPO43427 364 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 UBTFL1P0CB47 393 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-227ENST00000640648 ENOX2Q16206 610 aaKnown RBP9.64□□□□□ -0.87
NECAP1-227ENST00000640648 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
NECAP1-227ENST00000640648 ELP1O95163 1332 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 SYNJ2O15056 1496 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 SURF6O75683 361 aaKnown RBP9.64□□□□□ -0.87
NECAP1-227ENST00000640648 ZSCAN23Q3MJ62 389 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 EFCAB13Q8IY85 973 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 DACH1Q9UI36 760 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 MAP3K1Q13233 1512 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 RBM26Q5T8P6 1007 aaKnown RBP9.64□□□□□ -0.87
NECAP1-227ENST00000640648 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
NECAP1-227ENST00000640648 FAM210AQ96ND0 272 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 CABP1Q9NZU7 370 aa9.64□□□□□ -0.87
NECAP1-227ENST00000640648 HDAC1Q13547 482 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-227ENST00000640648 OLFM4Q6UX06 510 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 SPATA24Q86W54 205 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 MICALL1Q8N3F8 863 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 JRKLQ9Y4A0 524 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 RAD50Q92878 1312 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 IGHDP01880 384 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 G3BP1Q13283 466 aaKnown RBP eCLIP9.63□□□□□ -0.87
NECAP1-227ENST00000640648 MAP3K11Q16584 847 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 KRBA2Q6ZNG9 492 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 RASSF8Q8NHQ8 419 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 ZNF428Q96B54 188 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 RAB3GAP1Q15042 981 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 NBPF20Q3BBV1 942 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 MCTP2Q6DN12 878 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 CEP57L1Q8IYX8 460 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 SSH1Q8WYL5 1049 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 FMNL2Q96PY5 1086 aa9.63□□□□□ -0.87
NECAP1-227ENST00000640648 BAG4O95429 457 aaKnown RBP9.62□□□□□ -0.87
NECAP1-227ENST00000640648 SLC4A2P04920 1241 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 RLBP1P12271 317 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 CAPN2P17655 700 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 SLC8A1P32418 973 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 KIF5BP33176 963 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 AIMP1Q12904 312 aaKnown RBP9.62□□□□□ -0.87
NECAP1-227ENST00000640648 CCDC148Q8NFR7 591 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 RBM33Q96EV2 1170 aaKnown RBP9.62□□□□□ -0.87
NECAP1-227ENST00000640648 TCHPQ9BT92 498 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 PANK2Q9BZ23 570 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 NSD3Q9BZ95 1437 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 TMPOP42166 694 aaKnown RBP9.62□□□□□ -0.87
NECAP1-227ENST00000640648 FAM114A1Q8IWE2 563 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 RPUSD2Q8IZ73 545 aaKnown RBP9.62□□□□□ -0.87
NECAP1-227ENST00000640648 VEZTQ9HBM0 779 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 RAI14Q9P0K7 980 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 KRT85P78386 507 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 SULT6B1Q6IMI4 303 aa9.62□□□□□ -0.87
NECAP1-227ENST00000640648 ZSCAN31Q96LW9 406 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-227ENST00000640648 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.62□□□□□ -0.87
NECAP1-227ENST00000640648 OPA1O60313 960 aa9.61□□□□□ -0.87
NECAP1-227ENST00000640648 ADCY5O95622 1261 aa9.61□□□□□ -0.87
NECAP1-227ENST00000640648 GTF2E1P29083 439 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-227ENST00000640648 NEDD9Q14511 834 aa9.61□□□□□ -0.87
NECAP1-227ENST00000640648 NUP62CLQ9H1M0 184 aa9.61□□□□□ -0.87
NECAP1-227ENST00000640648 SYCE3A1L190 88 aa9.61□□□□□ -0.87
NECAP1-227ENST00000640648 KINO60870 393 aaKnown RBP9.61□□□□□ -0.87
NECAP1-227ENST00000640648 SFPQP23246 707 aaKnown RBP eCLIP9.61□□□□□ -0.87
NECAP1-227ENST00000640648 FILIP1LQ4L180 1135 aa9.61□□□□□ -0.87
NECAP1-227ENST00000640648 DRC1Q96MC2 740 aa9.61□□□□□ -0.87
NECAP1-227ENST00000640648 TNMDQ9H2S6 317 aa9.61□□□□□ -0.87
NECAP1-227ENST00000640648 DDX19AQ9NUU7 478 aaKnown RBP9.61□□□□□ -0.87
NECAP1-227ENST00000640648 TTC36A6NLP5 189 aa9.61□□□□□ -0.87
NECAP1-227ENST00000640648 CYB5RLQ6IPT4 315 aa9.61□□□□□ -0.87
NECAP1-227ENST00000640648 SECISBP2LQ93073 1101 aaKnown RBP9.61□□□□□ -0.87
NECAP1-227ENST00000640648 ZSCAN26Q16670 478 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 OTUD6BQ8N6M0 293 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 SPC24Q8NBT2 197 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 UTP14AQ9BVJ6 771 aaKnown RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 ARHGEF11O15085 1522 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 NKTRP30414 1462 aaKnown RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 LRPPRCP42704 1394 aaKnown RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 ERC2O15083 957 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 LUC7L3O95232 432 aaKnown RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 MAP4K4O95819 1239 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 SPECC1LQ69YQ0 1117 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 CENPHQ9H3R5 247 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 LUC7LQ9NQ29 371 aaKnown RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 DISP3Q9P2K9 1392 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 CPLX1O14810 134 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 GNAI3P08754 354 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 SF3B2Q13435 895 aaKnown RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 SNW1Q13573 536 aaKnown RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 PDCD2Q16342 344 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 ARFGAP2Q8N6H7 521 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms