RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
HLA-B-258ENST00000640615 TNS2Q63HR2 1409 aa11.37□□□□□ -0.59
HLA-B-258ENST00000640615 CHL1O00533 1208 aa11.37□□□□□ -0.59
HLA-B-258ENST00000640615 PKD1L3Q7Z443 1732 aa11.37□□□□□ -0.59
HLA-B-258ENST00000640615 KDM6AO15550 1401 aaPredicted RBP11.36□□□□□ -0.59
HLA-B-258ENST00000640615 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
HLA-B-258ENST00000640615 EXOSC9Q06265 439 aaKnown RBP11.36□□□□□ -0.59
HLA-B-258ENST00000640615 DEFB132Q7Z7B7 95 aa11.36□□□□□ -0.59
HLA-B-258ENST00000640615 MARCH10Q8NA82 808 aaPredicted RBP11.36□□□□□ -0.59
HLA-B-258ENST00000640615 NFATC2IPQ8NCF5 419 aa11.36□□□□□ -0.59
HLA-B-258ENST00000640615 SLC52A2Q9HAB3 445 aa11.36□□□□□ -0.59
HLA-B-258ENST00000640615 BABAM1Q9NWV8 329 aa11.36□□□□□ -0.59
HLA-B-258ENST00000640615 ERVV-2B6SEH9 535 aa11.35□□□□□ -0.59
HLA-B-258ENST00000640615 TNS1Q9HBL0 1735 aaKnown RBP11.35□□□□□ -0.59
HLA-B-258ENST00000640615 ELL2O00472 640 aaPredicted RBP11.33□□□□□ -0.6
HLA-B-258ENST00000640615 KCNQ3O43525 872 aa11.33□□□□□ -0.6
HLA-B-258ENST00000640615 C8orf58Q8NAV2 365 aa11.33□□□□□ -0.6
HLA-B-258ENST00000640615 SYTL4Q96C24 671 aaPredicted RBP11.33□□□□□ -0.6
HLA-B-258ENST00000640615 TMOD3Q9NYL9 352 aa11.33□□□□□ -0.6
HLA-B-258ENST00000640615 RCAN3Q9UKA8 241 aa11.33□□□□□ -0.6
HLA-B-258ENST00000640615 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
HLA-B-258ENST00000640615 LRRC37A3O60309 1634 aa11.32□□□□□ -0.6
HLA-B-258ENST00000640615 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
HLA-B-258ENST00000640615 SLC39A6Q13433 755 aa11.32□□□□□ -0.6
HLA-B-258ENST00000640615 SF3B2Q13435 895 aaKnown RBP11.32□□□□□ -0.6
HLA-B-258ENST00000640615 SHANK3Q9BYB0 1731 aa11.32□□□□□ -0.6
HLA-B-258ENST00000640615 CT47B1P0C2W7 299 aaPredicted RBP11.31□□□□□ -0.6
HLA-B-258ENST00000640615 KRT24Q2M2I5 525 aa11.31□□□□□ -0.6
HLA-B-258ENST00000640615 TWISTNBQ3B726 338 aaPredicted RBP11.31□□□□□ -0.6
HLA-B-258ENST00000640615 TTC5Q8N0Z6 440 aa11.31□□□□□ -0.6
HLA-B-258ENST00000640615 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
HLA-B-258ENST00000640615 ACSBG1Q96GR2 724 aa11.31□□□□□ -0.6
HLA-B-258ENST00000640615 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
HLA-B-258ENST00000640615 ADAMTS7Q9UKP4 1686 aa11.3□□□□□ -0.6
HLA-B-258ENST00000640615 BAG6P46379 1132 aa11.3□□□□□ -0.6
HLA-B-258ENST00000640615 EIF4A1P60842 406 aaKnown RBP11.3□□□□□ -0.6
HLA-B-258ENST00000640615 FAM182BQ5T319 152 aa11.3□□□□□ -0.6
HLA-B-258ENST00000640615 ZNF790Q6PG37 636 aa11.3□□□□□ -0.6
HLA-B-258ENST00000640615 PIGBQ92521 554 aa11.3□□□□□ -0.6
HLA-B-258ENST00000640615 VAMP4O75379 141 aa11.29□□□□□ -0.6
HLA-B-258ENST00000640615 MRC1P22897 1456 aa11.29□□□□□ -0.6
HLA-B-258ENST00000640615 SCN11AQ9UI33 1791 aa11.28□□□□□ -0.6
HLA-B-258ENST00000640615 RARSP54136 660 aaKnown RBP11.28□□□□□ -0.6
HLA-B-258ENST00000640615 FMNL2Q96PY5 1086 aa11.28□□□□□ -0.6
HLA-B-258ENST00000640615 RREB1Q92766 1687 aa11.27□□□□□ -0.6
HLA-B-258ENST00000640615 TCERG1O14776 1098 aaKnown RBP11.27□□□□□ -0.61
HLA-B-258ENST00000640615 KCNQ2O43526 872 aa11.27□□□□□ -0.61
HLA-B-258ENST00000640615 BCAR3O75815 825 aa11.27□□□□□ -0.61
HLA-B-258ENST00000640615 ZNF428Q96B54 188 aa11.27□□□□□ -0.61
HLA-B-258ENST00000640615 ZNF496Q96IT1 587 aaPredicted RBP11.27□□□□□ -0.61
HLA-B-258ENST00000640615 BCL2L13Q9BXK5 485 aa11.27□□□□□ -0.61
HLA-B-258ENST00000640615 ATG3Q9NT62 314 aa11.27□□□□□ -0.61
HLA-B-258ENST00000640615 ASAP1Q9ULH1 1129 aa11.27□□□□□ -0.61
HLA-B-258ENST00000640615 BCL9O00512 1426 aa11.26□□□□□ -0.61
HLA-B-258ENST00000640615 PTCD1O75127 700 aaKnown RBP11.26□□□□□ -0.61
HLA-B-258ENST00000640615 GIGYF1O75420 1035 aaPredicted RBP11.26□□□□□ -0.61
HLA-B-258ENST00000640615 SNRPA1P09661 255 aaKnown RBP11.26□□□□□ -0.61
HLA-B-258ENST00000640615 EIF2S2P20042 333 aaKnown RBP11.26□□□□□ -0.61
HLA-B-258ENST00000640615 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
HLA-B-258ENST00000640615 ALDH1L2Q3SY69 923 aa11.26□□□□□ -0.61
HLA-B-258ENST00000640615 FAM196AQ6ZSG2 479 aa11.26□□□□□ -0.61
HLA-B-258ENST00000640615 SSH1Q8WYL5 1049 aa11.26□□□□□ -0.61
HLA-B-258ENST00000640615 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
HLA-B-258ENST00000640615 CAMKK2Q96RR4 588 aa11.26□□□□□ -0.61
HLA-B-258ENST00000640615 SMC4Q9NTJ3 1288 aa11.26□□□□□ -0.61
HLA-B-258ENST00000640615 SOS1Q07889 1333 aaPredicted RBP11.26□□□□□ -0.61
HLA-B-258ENST00000640615 PRAMEF22A3QJZ6 481 aa11.25□□□□□ -0.61
HLA-B-258ENST00000640615 HOXB7P09629 217 aa11.25□□□□□ -0.61
HLA-B-258ENST00000640615 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
HLA-B-258ENST00000640615 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
HLA-B-258ENST00000640615 TOGARAM1Q9Y4F4 1720 aa11.25□□□□□ -0.61
HLA-B-258ENST00000640615 SIPA1L3O60292 1781 aaPredicted RBP11.24□□□□□ -0.61
HLA-B-258ENST00000640615 CANXP27824 592 aaKnown RBP11.24□□□□□ -0.61
HLA-B-258ENST00000640615 RRP1P56182 461 aaKnown RBP11.24□□□□□ -0.61
HLA-B-258ENST00000640615 CCDC30Q5VVM6 783 aa11.24□□□□□ -0.61
HLA-B-258ENST00000640615 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.24□□□□□ -0.61
HLA-B-258ENST00000640615 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
HLA-B-258ENST00000640615 STK31Q9BXU1 1019 aa11.24□□□□□ -0.61
HLA-B-258ENST00000640615 CHMP4AQ9BY43 222 aa11.24□□□□□ -0.61
HLA-B-258ENST00000640615 HEG1Q9ULI3 1381 aa11.24□□□□□ -0.61
HLA-B-258ENST00000640615 NUP188Q5SRE5 1749 aa11.23□□□□□ -0.61
HLA-B-258ENST00000640615 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
HLA-B-258ENST00000640615 VIRMAQ69YN4 1812 aaKnown RBP11.23□□□□□ -0.61
HLA-B-258ENST00000640615 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-258ENST00000640615 PLIN1O60240 522 aa11.23□□□□□ -0.61
HLA-B-258ENST00000640615 PTF1AQ7RTS3 328 aa11.23□□□□□ -0.61
HLA-B-258ENST00000640615 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
HLA-B-258ENST00000640615 SMARCC1Q92922 1105 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-258ENST00000640615 DOT1LQ8TEK3 1739 aa11.23□□□□□ -0.61
HLA-B-258ENST00000640615 RGPD3A6NKT7 1758 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-258ENST00000640615 RGPD4Q7Z3J3 1758 aa11.23□□□□□ -0.61
HLA-B-258ENST00000640615 TRIM37O94972 964 aa11.22□□□□□ -0.61
HLA-B-258ENST00000640615 SLC4A2P04920 1241 aa11.22□□□□□ -0.61
HLA-B-258ENST00000640615 NEFLP07196 543 aa11.22□□□□□ -0.61
HLA-B-258ENST00000640615 EZH2Q15910 746 aaKnown RBP11.22□□□□□ -0.61
HLA-B-258ENST00000640615 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
HLA-B-258ENST00000640615 BCL11BQ9C0K0 894 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-258ENST00000640615 NOB1Q9ULX3 412 aaKnown RBP11.22□□□□□ -0.61
HLA-B-258ENST00000640615 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
HLA-B-258ENST00000640615 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms