RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 ZNF530Q6P9A1 599 aaPredicted RBP16.56■□□□□ 0.24
SPIN3-235ENST00000640104 KRT28Q7Z3Y7 464 aa16.55■□□□□ 0.24
SPIN3-235ENST00000640104 MED1Q15648 1581 aaPredicted RBP16.55■□□□□ 0.24
SPIN3-235ENST00000640104 GSE1Q14687 1217 aa16.55■□□□□ 0.24
SPIN3-235ENST00000640104 ANKRD24Q8TF21 1146 aa16.55■□□□□ 0.24
SPIN3-235ENST00000640104 C1orf167Q5SNV9 1468 aa16.54■□□□□ 0.24
SPIN3-235ENST00000640104 GNAI3P08754 354 aa16.54■□□□□ 0.24
SPIN3-235ENST00000640104 EIF2S2P20042 333 aaKnown RBP16.54■□□□□ 0.24
SPIN3-235ENST00000640104 PLEKHO1Q53GL0 409 aaPredicted RBP16.54■□□□□ 0.24
SPIN3-235ENST00000640104 AKAP4Q5JQC9 854 aa16.54■□□□□ 0.24
SPIN3-235ENST00000640104 MPRIPQ6WCQ1 1025 aa16.54■□□□□ 0.24
SPIN3-235ENST00000640104 PHAXQ9H814 394 aaKnown RBP16.54■□□□□ 0.24
SPIN3-235ENST00000640104 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
SPIN3-235ENST00000640104 TEFQ10587 303 aa16.54■□□□□ 0.24
SPIN3-235ENST00000640104 KIF2CQ99661 725 aa16.54■□□□□ 0.24
SPIN3-235ENST00000640104 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
SPIN3-235ENST00000640104 EXOC6BQ9Y2D4 811 aa16.53■□□□□ 0.24
SPIN3-235ENST00000640104 KCNQ3O43525 872 aa16.53■□□□□ 0.24
SPIN3-235ENST00000640104 C19orf44Q9H6X5 657 aa16.53■□□□□ 0.24
SPIN3-235ENST00000640104 PXDNQ92626 1479 aa16.53■□□□□ 0.24
SPIN3-235ENST00000640104 SNX21Q969T3 373 aa16.52■□□□□ 0.24
SPIN3-235ENST00000640104 AXIN2Q9Y2T1 843 aa16.52■□□□□ 0.24
SPIN3-235ENST00000640104 LMO7Q8WWI1 1683 aa16.52■□□□□ 0.23
SPIN3-235ENST00000640104 PXDNLA1KZ92 1463 aa16.52■□□□□ 0.23
SPIN3-235ENST00000640104 SDSP20132 328 aa16.52■□□□□ 0.23
SPIN3-235ENST00000640104 AMOTQ4VCS5 1084 aa16.52■□□□□ 0.23
SPIN3-235ENST00000640104 PNMA6EA0A0J9YXQ4 647 aa16.51■□□□□ 0.23
SPIN3-235ENST00000640104 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
SPIN3-235ENST00000640104 C1orf141Q5JVX7 400 aa16.51■□□□□ 0.23
SPIN3-235ENST00000640104 CACNA1FO60840 1977 aa16.51■□□□□ 0.23
SPIN3-235ENST00000640104 LRRFIP2Q9Y608 721 aaKnown RBP16.51■□□□□ 0.23
SPIN3-235ENST00000640104 KDM3BQ7LBC6 1761 aa16.51■□□□□ 0.23
SPIN3-235ENST00000640104 NCAPD2Q15021 1401 aa16.51■□□□□ 0.23
SPIN3-235ENST00000640104 KIF1AQ12756 1690 aa16.5■□□□□ 0.23
SPIN3-235ENST00000640104 CHPF2Q9P2E5 772 aa16.5■□□□□ 0.23
SPIN3-235ENST00000640104 USP44Q9H0E7 712 aa16.49■□□□□ 0.23
SPIN3-235ENST00000640104 CHMP5Q9NZZ3 219 aa16.49■□□□□ 0.23
SPIN3-235ENST00000640104 RNMTO43148 476 aaKnown RBP16.49■□□□□ 0.23
SPIN3-235ENST00000640104 HOXB7P09629 217 aa16.49■□□□□ 0.23
SPIN3-235ENST00000640104 UBTFL1P0CB47 393 aaPredicted RBP16.49■□□□□ 0.23
SPIN3-235ENST00000640104 ZC3H6P61129 1189 aaKnown RBP16.49■□□□□ 0.23
SPIN3-235ENST00000640104 ATP8B2P98198 1209 aa16.49■□□□□ 0.23
SPIN3-235ENST00000640104 RBM42Q9BTD8 480 aaKnown RBP16.49■□□□□ 0.23
SPIN3-235ENST00000640104 N4BP2Q86UW6 1770 aaPredicted RBP16.49■□□□□ 0.23
SPIN3-235ENST00000640104 HSP90AB1P08238 724 aaKnown RBP16.48■□□□□ 0.23
SPIN3-235ENST00000640104 NCOA3Q9Y6Q9 1424 aa16.48■□□□□ 0.23
SPIN3-235ENST00000640104 CD2BP2O95400 341 aaKnown RBP16.48■□□□□ 0.23
SPIN3-235ENST00000640104 PDE1AP54750 535 aa16.48■□□□□ 0.23
SPIN3-235ENST00000640104 DDX17Q92841 729 aaKnown RBP16.48■□□□□ 0.23
SPIN3-235ENST00000640104 LRRCC1Q9C099 1032 aa16.48■□□□□ 0.23
SPIN3-235ENST00000640104 EIF5BO60841 1220 aaKnown RBP16.47■□□□□ 0.23
SPIN3-235ENST00000640104 ANXA1P04083 346 aa16.47■□□□□ 0.23
SPIN3-235ENST00000640104 ATF3P18847 181 aa16.47■□□□□ 0.23
SPIN3-235ENST00000640104 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
SPIN3-235ENST00000640104 TMEM94Q12767 1356 aa16.47■□□□□ 0.23
SPIN3-235ENST00000640104 SRCIN1Q9C0H9 1055 aa16.47■□□□□ 0.23
SPIN3-235ENST00000640104 ERBB3P21860 1342 aa16.46■□□□□ 0.23
SPIN3-235ENST00000640104 TSHZ3Q63HK5 1081 aa16.46■□□□□ 0.23
SPIN3-235ENST00000640104 OSBPL3Q9H4L5 887 aa16.46■□□□□ 0.23
SPIN3-235ENST00000640104 CAMTA1Q9Y6Y1 1673 aa16.46■□□□□ 0.23
SPIN3-235ENST00000640104 MST1RQ04912 1400 aa16.46■□□□□ 0.23
SPIN3-235ENST00000640104 IBTKQ9P2D0 1353 aaPredicted RBP16.46■□□□□ 0.23
SPIN3-235ENST00000640104 PI4KAP2A4QPH2 592 aa16.45■□□□□ 0.22
SPIN3-235ENST00000640104 PI4KAP1Q8N8J0 262 aa16.45■□□□□ 0.22
SPIN3-235ENST00000640104 CHMP4AQ9BY43 222 aa16.45■□□□□ 0.22
SPIN3-235ENST00000640104 ALS2Q96Q42 1657 aa16.45■□□□□ 0.22
SPIN3-235ENST00000640104 DNAAF4Q8WXU2 420 aa16.44■□□□□ 0.22
SPIN3-235ENST00000640104 USP26Q9BXU7 913 aa16.44■□□□□ 0.22
SPIN3-235ENST00000640104 SALL3Q9BXA9 1300 aa16.44■□□□□ 0.22
SPIN3-235ENST00000640104 RGPD5Q99666 1765 aa16.44■□□□□ 0.22
SPIN3-235ENST00000640104 OVOS2A0A0G2JMS6 1433 aa16.44■□□□□ 0.22
SPIN3-235ENST00000640104 K7ELQ4 463 aaPredicted RBP16.43■□□□□ 0.22
SPIN3-235ENST00000640104 DDIT3P35638 169 aa16.43■□□□□ 0.22
SPIN3-235ENST00000640104 MX1P20591 662 aa16.43■□□□□ 0.22
SPIN3-235ENST00000640104 BEND3Q5T5X7 828 aa16.43■□□□□ 0.22
SPIN3-235ENST00000640104 HSP90AA1P07900 732 aaKnown RBP16.43■□□□□ 0.22
SPIN3-235ENST00000640104 NBPF7P0C2Y1 421 aaPredicted RBP16.43■□□□□ 0.22
SPIN3-235ENST00000640104 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
SPIN3-235ENST00000640104 GIGYF1O75420 1035 aaPredicted RBP16.42■□□□□ 0.22
SPIN3-235ENST00000640104 MCM4P33991 863 aa16.42■□□□□ 0.22
SPIN3-235ENST00000640104 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
SPIN3-235ENST00000640104 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
SPIN3-235ENST00000640104 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
SPIN3-235ENST00000640104 ADCY9O60503 1353 aa16.42■□□□□ 0.22
SPIN3-235ENST00000640104 PRAMEF22A3QJZ6 481 aa16.42■□□□□ 0.22
SPIN3-235ENST00000640104 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
SPIN3-235ENST00000640104 STRCP1A6NGW2 1772 aa16.41■□□□□ 0.22
SPIN3-235ENST00000640104 RAPGEF4Q8WZA2 1011 aa16.41■□□□□ 0.22
SPIN3-235ENST00000640104 RABEP1Q15276 862 aa16.41■□□□□ 0.22
SPIN3-235ENST00000640104 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
SPIN3-235ENST00000640104 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
SPIN3-235ENST00000640104 ERC2O15083 957 aa16.4■□□□□ 0.22
SPIN3-235ENST00000640104 REC8O95072 547 aa16.4■□□□□ 0.22
SPIN3-235ENST00000640104 CABLES1Q8TDN4 633 aa16.4■□□□□ 0.22
SPIN3-235ENST00000640104 DCCP43146 1447 aa16.4■□□□□ 0.22
SPIN3-235ENST00000640104 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
SPIN3-235ENST00000640104 SRGAP3O43295 1099 aa16.39■□□□□ 0.21
SPIN3-235ENST00000640104 SURF6O75683 361 aaKnown RBP16.39■□□□□ 0.21
SPIN3-235ENST00000640104 POLA2Q14181 598 aa16.39■□□□□ 0.21
SPIN3-235ENST00000640104 MAP3K2Q9Y2U5 619 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms