RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 KIF2CQ99661 725 aa10.69□□□□□ -0.7
NECAP1-218ENST00000639595 MED1Q15648 1581 aaPredicted RBP10.69□□□□□ -0.7
NECAP1-218ENST00000639595 EIF4A1P60842 406 aaKnown RBP10.69□□□□□ -0.7
NECAP1-218ENST00000639595 PLEKHO1Q53GL0 409 aaPredicted RBP10.69□□□□□ -0.7
NECAP1-218ENST00000639595 C16orf71Q8IYS4 520 aaPredicted RBP10.69□□□□□ -0.7
NECAP1-218ENST00000639595 FKBP5Q13451 457 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-218ENST00000639595 PROSER2Q86WR7 435 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-218ENST00000639595 SLKQ9H2G2 1235 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-218ENST00000639595 OSBPL3Q9H4L5 887 aa10.68□□□□□ -0.7
NECAP1-218ENST00000639595 LGR6Q9HBX8 967 aa10.68□□□□□ -0.7
NECAP1-218ENST00000639595 LTN1O94822 1766 aa10.68□□□□□ -0.7
NECAP1-218ENST00000639595 GSE1Q14687 1217 aa10.68□□□□□ -0.7
NECAP1-218ENST00000639595 C1orf167Q5SNV9 1468 aa10.67□□□□□ -0.7
NECAP1-218ENST00000639595 ATP8B2P98198 1209 aa10.67□□□□□ -0.7
NECAP1-218ENST00000639595 HDGFL1Q5TGJ6 251 aa10.67□□□□□ -0.7
NECAP1-218ENST00000639595 KRT28Q7Z3Y7 464 aa10.67□□□□□ -0.7
NECAP1-218ENST00000639595 PXDNLA1KZ92 1463 aa10.67□□□□□ -0.7
NECAP1-218ENST00000639595 LRRC59Q96AG4 307 aaKnown RBP10.67□□□□□ -0.7
NECAP1-218ENST00000639595 HSCBQ8IWL3 235 aa10.66□□□□□ -0.7
NECAP1-218ENST00000639595 OTUD7AQ8TE49 926 aaPredicted RBP10.66□□□□□ -0.7
NECAP1-218ENST00000639595 USP44Q9H0E7 712 aa10.66□□□□□ -0.7
NECAP1-218ENST00000639595 OVOS2A0A0G2JMS6 1433 aa10.66□□□□□ -0.7
NECAP1-218ENST00000639595 NCOA3Q9Y6Q9 1424 aa10.66□□□□□ -0.7
NECAP1-218ENST00000639595 DDIT3P35638 169 aa10.66□□□□□ -0.7
NECAP1-218ENST00000639595 ZNF530Q6P9A1 599 aaPredicted RBP10.66□□□□□ -0.7
NECAP1-218ENST00000639595 CHMP5Q9NZZ3 219 aa10.66□□□□□ -0.7
NECAP1-218ENST00000639595 XPCQ01831 940 aaPredicted RBP10.65□□□□□ -0.7
NECAP1-218ENST00000639595 ANKRD24Q8TF21 1146 aa10.65□□□□□ -0.7
NECAP1-218ENST00000639595 LMTK3Q96Q04 1460 aa10.65□□□□□ -0.7
NECAP1-218ENST00000639595 RNMTO43148 476 aaKnown RBP10.65□□□□□ -0.71
NECAP1-218ENST00000639595 SMARCA5O60264 1052 aaPredicted RBP10.65□□□□□ -0.71
NECAP1-218ENST00000639595 SDSP20132 328 aa10.65□□□□□ -0.71
NECAP1-218ENST00000639595 NECTIN2Q92692 538 aa10.65□□□□□ -0.71
NECAP1-218ENST00000639595 AXIN2Q9Y2T1 843 aa10.65□□□□□ -0.71
NECAP1-218ENST00000639595 CACNA1FO60840 1977 aa10.64□□□□□ -0.71
NECAP1-218ENST00000639595 SALL3Q9BXA9 1300 aa10.64□□□□□ -0.71
NECAP1-218ENST00000639595 FAM208AQ9UK61 1670 aaKnown RBP10.64□□□□□ -0.71
NECAP1-218ENST00000639595 TEFQ10587 303 aa10.64□□□□□ -0.71
NECAP1-218ENST00000639595 HEG1Q9ULI3 1381 aa10.64□□□□□ -0.71
NECAP1-218ENST00000639595 BTBD11A6QL63 1104 aa10.64□□□□□ -0.71
NECAP1-218ENST00000639595 PDE1AP54750 535 aa10.64□□□□□ -0.71
NECAP1-218ENST00000639595 USP26Q9BXU7 913 aa10.64□□□□□ -0.71
NECAP1-218ENST00000639595 PHAXQ9H814 394 aaKnown RBP10.64□□□□□ -0.71
NECAP1-218ENST00000639595 TRPM3Q9HCF6 1732 aaPredicted RBP10.64□□□□□ -0.71
NECAP1-218ENST00000639595 PNMA6EA0A0J9YXQ4 647 aa10.63□□□□□ -0.71
NECAP1-218ENST00000639595 IBTKQ9P2D0 1353 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-218ENST00000639595 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
NECAP1-218ENST00000639595 DCCP43146 1447 aa10.63□□□□□ -0.71
NECAP1-218ENST00000639595 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
NECAP1-218ENST00000639595 KCNQ3O43525 872 aa10.63□□□□□ -0.71
NECAP1-218ENST00000639595 C1orf141Q5JVX7 400 aa10.63□□□□□ -0.71
NECAP1-218ENST00000639595 MPRIPQ6WCQ1 1025 aa10.63□□□□□ -0.71
NECAP1-218ENST00000639595 SSH3Q8TE77 659 aa10.63□□□□□ -0.71
NECAP1-218ENST00000639595 KIF1AQ12756 1690 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 LRRCC1Q9C099 1032 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 SRCIN1Q9C0H9 1055 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 STAP2Q9UGK3 403 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
NECAP1-218ENST00000639595 LRRFIP2Q9Y608 721 aaKnown RBP10.62□□□□□ -0.71
NECAP1-218ENST00000639595 ERBB3P21860 1342 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 CAMTA1Q9Y6Y1 1673 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 PLEKHG5O94827 1062 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 UBTFL1P0CB47 393 aaPredicted RBP10.62□□□□□ -0.71
NECAP1-218ENST00000639595 TPRNQ4KMQ1 711 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 BEND3Q5T5X7 828 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 LMOD2Q6P5Q4 547 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 CASC1Q6TDU7 716 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 CHPF2Q9P2E5 772 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 EXOC6BQ9Y2D4 811 aa10.62□□□□□ -0.71
NECAP1-218ENST00000639595 APBB1O00213 710 aa10.61□□□□□ -0.71
NECAP1-218ENST00000639595 GIGYF1O75420 1035 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-218ENST00000639595 ATF3P18847 181 aa10.61□□□□□ -0.71
NECAP1-218ENST00000639595 EIF2S2P20042 333 aaKnown RBP10.61□□□□□ -0.71
NECAP1-218ENST00000639595 POLA2Q14181 598 aa10.61□□□□□ -0.71
NECAP1-218ENST00000639595 TMEM94Q12767 1356 aa10.61□□□□□ -0.71
NECAP1-218ENST00000639595 RABEP1Q15276 862 aa10.61□□□□□ -0.71
NECAP1-218ENST00000639595 KDM3BQ7LBC6 1761 aa10.61□□□□□ -0.71
NECAP1-218ENST00000639595 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
NECAP1-218ENST00000639595 DNAAF4Q8WXU2 420 aa10.61□□□□□ -0.71
NECAP1-218ENST00000639595 PXDNQ92626 1479 aa10.61□□□□□ -0.71
NECAP1-218ENST00000639595 PLEKHG2Q9H7P9 1386 aa10.61□□□□□ -0.71
NECAP1-218ENST00000639595 DBF4Q9UBU7 674 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-218ENST00000639595 N4BP2Q86UW6 1770 aaPredicted RBP10.6□□□□□ -0.71
NECAP1-218ENST00000639595 MCM4P33991 863 aa10.6□□□□□ -0.71
NECAP1-218ENST00000639595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.6□□□□□ -0.71
NECAP1-218ENST00000639595 PI4KAP2A4QPH2 592 aa10.6□□□□□ -0.71
NECAP1-218ENST00000639595 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
NECAP1-218ENST00000639595 RAB11FIP3O75154 756 aa10.6□□□□□ -0.71
NECAP1-218ENST00000639595 REC8O95072 547 aa10.6□□□□□ -0.71
NECAP1-218ENST00000639595 CD2BP2O95400 341 aaKnown RBP10.6□□□□□ -0.71
NECAP1-218ENST00000639595 PI4KAP1Q8N8J0 262 aa10.6□□□□□ -0.71
NECAP1-218ENST00000639595 AOX1Q06278 1338 aa10.59□□□□□ -0.71
NECAP1-218ENST00000639595 MX1P20591 662 aa10.59□□□□□ -0.71
NECAP1-218ENST00000639595 RBM42Q9BTD8 480 aaKnown RBP10.59□□□□□ -0.71
NECAP1-218ENST00000639595 ADCY9O60503 1353 aa10.59□□□□□ -0.71
NECAP1-218ENST00000639595 ALS2Q96Q42 1657 aa10.59□□□□□ -0.71
NECAP1-218ENST00000639595 ERC2O15083 957 aa10.59□□□□□ -0.71
NECAP1-218ENST00000639595 HSP90AB1P08238 724 aaKnown RBP10.59□□□□□ -0.71
NECAP1-218ENST00000639595 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
NECAP1-218ENST00000639595 RGPD2P0DJD1 1756 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms