RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 PPP1R42Q7Z4L9 355 aa12.08□□□□□ -0.47
KCNQ3-208ENST00000639496 DNAAF4Q8WXU2 420 aa12.08□□□□□ -0.47
KCNQ3-208ENST00000639496 RNF41Q9H4P4 317 aaPredicted RBP12.08□□□□□ -0.47
KCNQ3-208ENST00000639496 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.47
KCNQ3-208ENST00000639496 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.47
KCNQ3-208ENST00000639496 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.47
KCNQ3-208ENST00000639496 IQGAP2Q13576 1575 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 PPFIBP1Q86W92 1011 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 USHBP1Q8N6Y0 703 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 DEF6Q9H4E7 631 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 CEP131Q9UPN4 1083 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 LAMC3Q9Y6N6 1575 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 SERPINC1P01008 464 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 RFC4P35249 363 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 PPP4R3AQ6IN85 833 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 RNF214Q8ND24 703 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 EXOC6BQ9Y2D4 811 aa12.08□□□□□ -0.48
KCNQ3-208ENST00000639496 ALDH1L2Q3SY69 923 aa12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 TTLL5Q6EMB2 1281 aa12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 PPP1R12BO60237 982 aaPredicted RBP12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 PRPF40AO75400 957 aaKnown RBP12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 MRE11P49959 708 aa12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 CCDC192P0DO97 292 aa12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 NASPP49321 788 aaPredicted RBP12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 CCDC39Q9UFE4 941 aa12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 ERLIN2O94905 339 aa12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 MATR3P43243 847 aaKnown RBP eCLIP12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 CAVIN1Q6NZI2 390 aaKnown RBP12.07□□□□□ -0.48
KCNQ3-208ENST00000639496 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 THUMPD2Q9BTF0 503 aaKnown RBP12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 TNRQ92752 1358 aa12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 SCLT1Q96NL6 688 aa12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 RAB34Q9BZG1 259 aa12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 EMILIN1Q9Y6C2 1016 aa12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 CDK13Q14004 1512 aaKnown RBP12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 DCTN1Q14203 1278 aa12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 NOM1Q5C9Z4 860 aaKnown RBP12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 CUL5Q93034 780 aa12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 PLB1Q6P1J6 1458 aa12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 TNMDQ9H2S6 317 aa12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 DNAJC5BQ9UF47 199 aa12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 GRIN2AQ12879 1464 aa12.06□□□□□ -0.48
KCNQ3-208ENST00000639496 BAG3O95817 575 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 CEP57L1Q8IYX8 460 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 FEZ1Q99689 392 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 TSPY26PQ9H489 355 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 MX1P20591 662 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 CCDC96Q2M329 555 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 EHMT1Q9H9B1 1298 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 GPTP24298 496 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 SPTY2D1Q68D10 685 aaPredicted RBP12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 LDHAL6AQ6ZMR3 332 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 TMEM57Q8N5G2 664 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 ZBTB3Q9H5J0 574 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 CABP5Q9NP86 173 aa12.05□□□□□ -0.48
KCNQ3-208ENST00000639496 K7ELQ4 463 aaPredicted RBP12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 MYO1BO43795 1136 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 NUTM1Q86Y26 1132 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 CBFA2T2O43439 604 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 TRAK2O60296 914 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 ST5P78524 1137 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 SLFN5Q08AF3 891 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 PIBF1Q8WXW3 757 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 ZNF622Q969S3 477 aaKnown RBP eCLIP12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 ADGRF5Q8IZF2 1346 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 DHX29Q7Z478 1369 aaKnown RBP12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 FAM43AQ8N2R8 423 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 ANKRD24Q8TF21 1146 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 SPATA32Q96LK8 384 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 BOLA2Q9H3K6 86 aa12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 RANBP6O60518 1105 aaKnown RBP12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 CWC25Q9NXE8 425 aaPredicted RBP12.04□□□□□ -0.48
KCNQ3-208ENST00000639496 FANCAO15360 1455 aa12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 NEBLO76041 1014 aa12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 HLA-DOAP06340 250 aa12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 TTF1Q15361 905 aaPredicted RBP12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 NBPF6Q5VWK0 638 aa12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 NBPF5PQ86XG9 351 aaPredicted RBP12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 NBPF4Q96M43 638 aa12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 C14orf93Q9H972 538 aaKnown RBP12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 NAIPQ13075 1403 aa12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 HSP90AA2PQ14568 343 aaPredicted RBP12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 PHAXQ9H814 394 aaKnown RBP12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 NSD2O96028 1365 aa12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 NEFHP12036 1026 aa12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
KCNQ3-208ENST00000639496 CHRNA2Q15822 529 aa12.02□□□□□ -0.48
KCNQ3-208ENST00000639496 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.48
KCNQ3-208ENST00000639496 ZNF213O14771 459 aa12.02□□□□□ -0.49
KCNQ3-208ENST00000639496 IBSPP21815 317 aaPredicted RBP12.02□□□□□ -0.49
KCNQ3-208ENST00000639496 CETN2P41208 172 aa12.02□□□□□ -0.49
KCNQ3-208ENST00000639496 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms