RNA–Protein interactions for RNA: ENST00000639418.1

SPIN3-221, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-221ENST00000639418 SBNO1A3KN83 1393 aa16.13■□□□□ 0.17
SPIN3-221ENST00000639418 TTC21AQ8NDW8 1320 aa16.13■□□□□ 0.17
SPIN3-221ENST00000639418 ZGPATQ8N5A5 531 aaKnown RBP16.13■□□□□ 0.17
SPIN3-221ENST00000639418 STK31Q9BXU1 1019 aa16.13■□□□□ 0.17
SPIN3-221ENST00000639418 EXOC6BQ9Y2D4 811 aa16.12■□□□□ 0.17
SPIN3-221ENST00000639418 NASPP49321 788 aaPredicted RBP16.12■□□□□ 0.17
SPIN3-221ENST00000639418 KDRP35968 1356 aa16.12■□□□□ 0.17
SPIN3-221ENST00000639418 AMPHP49418 695 aa16.12■□□□□ 0.17
SPIN3-221ENST00000639418 SLC26A8Q96RN1 970 aa16.12■□□□□ 0.17
SPIN3-221ENST00000639418 EYA1Q99502 592 aa16.12■□□□□ 0.17
SPIN3-221ENST00000639418 LMBRD1Q9NUN5 540 aa16.12■□□□□ 0.17
SPIN3-221ENST00000639418 NCLP19338 710 aaKnown RBP16.11■□□□□ 0.17
SPIN3-221ENST00000639418 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
SPIN3-221ENST00000639418 CEP170BQ9Y4F5 1589 aaPredicted RBP16.11■□□□□ 0.17
SPIN3-221ENST00000639418 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
SPIN3-221ENST00000639418 CCDC173Q0VFZ6 552 aa16.1■□□□□ 0.17
SPIN3-221ENST00000639418 TSHZ3Q63HK5 1081 aa16.1■□□□□ 0.17
SPIN3-221ENST00000639418 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
SPIN3-221ENST00000639418 CAVIN1Q6NZI2 390 aaKnown RBP16.1■□□□□ 0.17
SPIN3-221ENST00000639418 FLIIQ13045 1269 aa16.09■□□□□ 0.17
SPIN3-221ENST00000639418 FKBP5Q13451 457 aaPredicted RBP16.09■□□□□ 0.17
SPIN3-221ENST00000639418 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
SPIN3-221ENST00000639418 GNAI3P08754 354 aa16.09■□□□□ 0.17
SPIN3-221ENST00000639418 ZNF445P59923 1031 aa16.09■□□□□ 0.17
SPIN3-221ENST00000639418 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
SPIN3-221ENST00000639418 ANP32BQ92688 251 aaKnown RBP16.09■□□□□ 0.17
SPIN3-221ENST00000639418 PDCL3Q9H2J4 239 aa16.09■□□□□ 0.17
SPIN3-221ENST00000639418 ZDHHC9Q9Y397 364 aa16.09■□□□□ 0.17
SPIN3-221ENST00000639418 SALL3Q9BXA9 1300 aa16.08■□□□□ 0.17
SPIN3-221ENST00000639418 MX1P20591 662 aa16.08■□□□□ 0.16
SPIN3-221ENST00000639418 NEK4P51957 841 aa16.08■□□□□ 0.16
SPIN3-221ENST00000639418 ZSCAN23Q3MJ62 389 aa16.08■□□□□ 0.16
SPIN3-221ENST00000639418 NECTIN2Q92692 538 aa16.08■□□□□ 0.16
SPIN3-221ENST00000639418 PPP1R9BQ96SB3 815 aa16.08■□□□□ 0.16
SPIN3-221ENST00000639418 AMOTL2Q9Y2J4 779 aa16.08■□□□□ 0.16
SPIN3-221ENST00000639418 PNMA6EA0A0J9YXQ4 647 aa16.08■□□□□ 0.16
SPIN3-221ENST00000639418 HTATSF1O43719 755 aaKnown RBP16.08■□□□□ 0.16
SPIN3-221ENST00000639418 ESYT1Q9BSJ8 1104 aa16.08■□□□□ 0.16
SPIN3-221ENST00000639418 PRPF40AO75400 957 aaKnown RBP16.07■□□□□ 0.16
SPIN3-221ENST00000639418 ATP8B2P98198 1209 aa16.07■□□□□ 0.16
SPIN3-221ENST00000639418 FAM208AQ9UK61 1670 aaKnown RBP16.07■□□□□ 0.16
SPIN3-221ENST00000639418 GNAT3A8MTJ3 354 aa16.07■□□□□ 0.16
SPIN3-221ENST00000639418 LRRC37A3O60309 1634 aa16.06■□□□□ 0.16
SPIN3-221ENST00000639418 XRN1Q8IZH2 1706 aaKnown RBP16.06■□□□□ 0.16
SPIN3-221ENST00000639418 RILPL2Q969X0 211 aa16.06■□□□□ 0.16
SPIN3-221ENST00000639418 EID1Q9Y6B2 187 aa16.06■□□□□ 0.16
SPIN3-221ENST00000639418 TRIM6-TRIM34B2RNG4 842 aa16.05■□□□□ 0.16
SPIN3-221ENST00000639418 MCCP23508 829 aa16.05■□□□□ 0.16
SPIN3-221ENST00000639418 TMX3Q96JJ7 454 aa16.05■□□□□ 0.16
SPIN3-221ENST00000639418 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
SPIN3-221ENST00000639418 PIK3C2AO00443 1686 aa16.05■□□□□ 0.16
SPIN3-221ENST00000639418 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-221ENST00000639418 MCM2P49736 904 aa16.05■□□□□ 0.16
SPIN3-221ENST00000639418 GPT2Q8TD30 523 aa16.05■□□□□ 0.16
SPIN3-221ENST00000639418 LRRFIP2Q9Y608 721 aaKnown RBP16.05■□□□□ 0.16
SPIN3-221ENST00000639418 CHMLP26374 656 aa16.04■□□□□ 0.16
SPIN3-221ENST00000639418 DIP2AQ14689 1571 aa16.04■□□□□ 0.16
SPIN3-221ENST00000639418 NLRP6P59044 892 aa16.04■□□□□ 0.16
SPIN3-221ENST00000639418 ANO2Q9NQ90 1003 aa16.04■□□□□ 0.16
SPIN3-221ENST00000639418 PALD1Q9ULE6 856 aa16.03■□□□□ 0.16
SPIN3-221ENST00000639418 KIF13AQ9H1H9 1805 aa16.03■□□□□ 0.16
SPIN3-221ENST00000639418 FOXD4L5Q5VV16 416 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-221ENST00000639418 FOXD4L4Q8WXT5 416 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-221ENST00000639418 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
SPIN3-221ENST00000639418 SRCIN1Q9C0H9 1055 aa16.03■□□□□ 0.16
SPIN3-221ENST00000639418 STAP2Q9UGK3 403 aa16.03■□□□□ 0.16
SPIN3-221ENST00000639418 HOXC9P31274 260 aa16.02■□□□□ 0.16
SPIN3-221ENST00000639418 IL17REQ8NFR9 667 aa16.02■□□□□ 0.16
SPIN3-221ENST00000639418 RBM27Q9P2N5 1060 aaKnown RBP16.02■□□□□ 0.16
SPIN3-221ENST00000639418 MAP3K5Q99683 1374 aa16.02■□□□□ 0.16
SPIN3-221ENST00000639418 CEBPAP49715 358 aaPredicted RBP16.02■□□□□ 0.15
SPIN3-221ENST00000639418 ANAPC15P60006 121 aa16.02■□□□□ 0.15
SPIN3-221ENST00000639418 RBSNQ9H1K0 784 aa16.02■□□□□ 0.15
SPIN3-221ENST00000639418 SOS1Q07889 1333 aaPredicted RBP16.02■□□□□ 0.15
SPIN3-221ENST00000639418 NUTM2GQ5VZR2 741 aa16.01■□□□□ 0.15
SPIN3-221ENST00000639418 USP44Q9H0E7 712 aa16.01■□□□□ 0.15
SPIN3-221ENST00000639418 UBTFL1P0CB47 393 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-221ENST00000639418 PRIM1P49642 420 aaKnown RBP16.01■□□□□ 0.15
SPIN3-221ENST00000639418 TAF7Q15545 349 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-221ENST00000639418 TBX22Q9Y458 520 aa16.01■□□□□ 0.15
SPIN3-221ENST00000639418 CUL4AQ13619 759 aa16.01■□□□□ 0.15
SPIN3-221ENST00000639418 ZSCAN30Q86W11 494 aa16.01■□□□□ 0.15
SPIN3-221ENST00000639418 UNC5CLQ8IV45 518 aa16.01■□□□□ 0.15
SPIN3-221ENST00000639418 PXDNLA1KZ92 1463 aa16■□□□□ 0.15
SPIN3-221ENST00000639418 NOL8Q76FK4 1167 aaKnown RBP16■□□□□ 0.15
SPIN3-221ENST00000639418 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
SPIN3-221ENST00000639418 LTV1Q96GA3 475 aaPredicted RBP16■□□□□ 0.15
SPIN3-221ENST00000639418 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
SPIN3-221ENST00000639418 NWD1Q149M9 1564 aa15.99■□□□□ 0.15
SPIN3-221ENST00000639418 BRD1O95696 1058 aa15.99■□□□□ 0.15
SPIN3-221ENST00000639418 IL1RAPL2Q9NP60 686 aa15.99■□□□□ 0.15
SPIN3-221ENST00000639418 AOX1Q06278 1338 aa15.99■□□□□ 0.15
SPIN3-221ENST00000639418 CACNA1FO60840 1977 aa15.99■□□□□ 0.15
SPIN3-221ENST00000639418 TMEM63CQ9P1W3 806 aa15.99■□□□□ 0.15
SPIN3-221ENST00000639418 HDGFL1Q5TGJ6 251 aa15.98■□□□□ 0.15
SPIN3-221ENST00000639418 INTS4Q96HW7 963 aaKnown RBP15.98■□□□□ 0.15
SPIN3-221ENST00000639418 PHAXQ9H814 394 aaKnown RBP15.98■□□□□ 0.15
SPIN3-221ENST00000639418 NSFL1CQ9UNZ2 370 aaKnown RBP15.98■□□□□ 0.15
SPIN3-221ENST00000639418 SSH3Q8TE77 659 aa15.98■□□□□ 0.15
SPIN3-221ENST00000639418 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms