RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 RBM10P98175 930 aaKnown RBP13.3□□□□□ -0.28
SNIP1-204ENST00000638725 CUL4AQ13619 759 aa13.3□□□□□ -0.28
SNIP1-204ENST00000638725 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
SNIP1-204ENST00000638725 PEAK1Q9H792 1746 aa13.3□□□□□ -0.28
SNIP1-204ENST00000638725 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 MX1P20591 662 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 RILPL2Q969X0 211 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 ZMYND15Q9H091 742 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 PDCL3Q9H2J4 239 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 PNMA6EA0A0J9YXQ4 647 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 MCM2P49736 904 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 FOXD4L6Q3SYB3 417 aaPredicted RBP13.29□□□□□ -0.28
SNIP1-204ENST00000638725 FOXD4L3Q6VB84 417 aaPredicted RBP13.29□□□□□ -0.28
SNIP1-204ENST00000638725 LRRCC1Q9C099 1032 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 OVOS2A0A0J9YW53 1432 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 OVOS2Q6IE36 1432 aa13.29□□□□□ -0.28
SNIP1-204ENST00000638725 MCCP23508 829 aa13.28□□□□□ -0.28
SNIP1-204ENST00000638725 CHMLP26374 656 aa13.28□□□□□ -0.28
SNIP1-204ENST00000638725 MTHFSDQ2M296 383 aaKnown RBP13.28□□□□□ -0.28
SNIP1-204ENST00000638725 MAP3K19Q56UN5 1328 aa13.28□□□□□ -0.28
SNIP1-204ENST00000638725 TERF1P54274 439 aa13.28□□□□□ -0.28
SNIP1-204ENST00000638725 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
SNIP1-204ENST00000638725 ACEP12821 1306 aa13.28□□□□□ -0.28
SNIP1-204ENST00000638725 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.28
SNIP1-204ENST00000638725 TUBGCP6Q96RT7 1819 aa13.27□□□□□ -0.28
SNIP1-204ENST00000638725 RIMS1Q86UR5 1692 aaKnown RBP13.27□□□□□ -0.28
SNIP1-204ENST00000638725 RGPD1P0DJD0 1748 aa13.27□□□□□ -0.28
SNIP1-204ENST00000638725 UNC5CLQ8IV45 518 aa13.27□□□□□ -0.29
SNIP1-204ENST00000638725 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.29
SNIP1-204ENST00000638725 NECTIN2Q92692 538 aa13.26□□□□□ -0.29
SNIP1-204ENST00000638725 CCDC39Q9UFE4 941 aa13.26□□□□□ -0.29
SNIP1-204ENST00000638725 TECPR2O15040 1411 aa13.26□□□□□ -0.29
SNIP1-204ENST00000638725 INTS4Q96HW7 963 aaKnown RBP13.26□□□□□ -0.29
SNIP1-204ENST00000638725 ANAPC15P60006 121 aa13.26□□□□□ -0.29
SNIP1-204ENST00000638725 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
SNIP1-204ENST00000638725 STK31Q9BXU1 1019 aa13.26□□□□□ -0.29
SNIP1-204ENST00000638725 IL25Q9H293 177 aa13.26□□□□□ -0.29
SNIP1-204ENST00000638725 TSPY26PQ9H489 355 aa13.26□□□□□ -0.29
SNIP1-204ENST00000638725 ROBO2Q9HCK4 1378 aa13.25□□□□□ -0.29
SNIP1-204ENST00000638725 UQCRHLA0A096LP55 91 aa13.25□□□□□ -0.29
SNIP1-204ENST00000638725 GADD45BO75293 160 aaPredicted RBP13.25□□□□□ -0.29
SNIP1-204ENST00000638725 UQCRHP07919 91 aa13.25□□□□□ -0.29
SNIP1-204ENST00000638725 FLIIQ13045 1269 aa13.25□□□□□ -0.29
SNIP1-204ENST00000638725 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
SNIP1-204ENST00000638725 PKNOX2Q96KN3 472 aa13.25□□□□□ -0.29
SNIP1-204ENST00000638725 FAM13BQ9NYF5 915 aa13.25□□□□□ -0.29
SNIP1-204ENST00000638725 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
SNIP1-204ENST00000638725 PPP6R1Q9UPN7 881 aa13.25□□□□□ -0.29
SNIP1-204ENST00000638725 GNAI3P08754 354 aa13.24□□□□□ -0.29
SNIP1-204ENST00000638725 MCM5P33992 734 aa13.24□□□□□ -0.29
SNIP1-204ENST00000638725 LRRFIP2Q9Y608 721 aaKnown RBP13.24□□□□□ -0.29
SNIP1-204ENST00000638725 USP6P35125 1406 aa13.24□□□□□ -0.29
SNIP1-204ENST00000638725 SSH2Q76I76 1423 aa13.24□□□□□ -0.29
SNIP1-204ENST00000638725 ARHGEF10O15013 1369 aa13.24□□□□□ -0.29
SNIP1-204ENST00000638725 AGLP35573 1532 aa13.23□□□□□ -0.29
SNIP1-204ENST00000638725 IL1RAPL2Q9NP60 686 aa13.23□□□□□ -0.29
SNIP1-204ENST00000638725 STAP2Q9UGK3 403 aa13.23□□□□□ -0.29
SNIP1-204ENST00000638725 USP31Q70CQ4 1352 aa13.23□□□□□ -0.29
SNIP1-204ENST00000638725 PTMAP06454 111 aaKnown RBP13.23□□□□□ -0.29
SNIP1-204ENST00000638725 CSPP1Q1MSJ5 1256 aa13.23□□□□□ -0.29
SNIP1-204ENST00000638725 SYAP1Q96A49 352 aaPredicted RBP13.23□□□□□ -0.29
SNIP1-204ENST00000638725 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
SNIP1-204ENST00000638725 USP48Q86UV5 1035 aa13.22□□□□□ -0.29
SNIP1-204ENST00000638725 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.29
SNIP1-204ENST00000638725 MAP4K4O95819 1239 aaPredicted RBP13.21□□□□□ -0.29
SNIP1-204ENST00000638725 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
SNIP1-204ENST00000638725 XRN1Q8IZH2 1706 aaKnown RBP13.21□□□□□ -0.29
SNIP1-204ENST00000638725 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.21□□□□□ -0.29
SNIP1-204ENST00000638725 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.29
SNIP1-204ENST00000638725 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
SNIP1-204ENST00000638725 MPNDQ8N594 471 aa13.21□□□□□ -0.29
SNIP1-204ENST00000638725 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
SNIP1-204ENST00000638725 EYA1Q99502 592 aa13.21□□□□□ -0.29
SNIP1-204ENST00000638725 SRCIN1Q9C0H9 1055 aa13.21□□□□□ -0.29
SNIP1-204ENST00000638725 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNIP1-204ENST00000638725 CEP170BQ9Y4F5 1589 aaPredicted RBP13.21□□□□□ -0.3
SNIP1-204ENST00000638725 WDR33Q9C0J8 1336 aaKnown RBP13.21□□□□□ -0.3
SNIP1-204ENST00000638725 RPAP1Q9BWH6 1393 aaPredicted RBP13.2□□□□□ -0.3
SNIP1-204ENST00000638725 TOPAZ1Q8N9V7 1692 aa13.2□□□□□ -0.3
SNIP1-204ENST00000638725 FAM208AQ9UK61 1670 aaKnown RBP13.2□□□□□ -0.3
SNIP1-204ENST00000638725 ZBTB7CA1YPR0 619 aa13.2□□□□□ -0.3
SNIP1-204ENST00000638725 HSPA4P34932 840 aa13.2□□□□□ -0.3
SNIP1-204ENST00000638725 FAM69CQ0P6D2 419 aa13.2□□□□□ -0.3
SNIP1-204ENST00000638725 USP44Q9H0E7 712 aa13.2□□□□□ -0.3
SNIP1-204ENST00000638725 KDRP35968 1356 aa13.19□□□□□ -0.3
SNIP1-204ENST00000638725 PHF14O94880 888 aa13.19□□□□□ -0.3
SNIP1-204ENST00000638725 SASS6Q6UVJ0 657 aa13.19□□□□□ -0.3
SNIP1-204ENST00000638725 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
SNIP1-204ENST00000638725 FLT4P35916 1363 aa13.19□□□□□ -0.3
SNIP1-204ENST00000638725 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
SNIP1-204ENST00000638725 TCHHQ07283 1943 aa13.19□□□□□ -0.3
SNIP1-204ENST00000638725 UBTFL1P0CB47 393 aaPredicted RBP13.19□□□□□ -0.3
SNIP1-204ENST00000638725 CNPY2Q9Y2B0 182 aa13.19□□□□□ -0.3
SNIP1-204ENST00000638725 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
SNIP1-204ENST00000638725 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
SNIP1-204ENST00000638725 KIAA2012Q0VF49 1180 aa13.18□□□□□ -0.3
SNIP1-204ENST00000638725 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
SNIP1-204ENST00000638725 SBNO1A3KN83 1393 aa13.18□□□□□ -0.3
SNIP1-204ENST00000638725 AOX1Q06278 1338 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms